Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3022 |
Symbol | pgsA |
ID | 1184679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3397895 |
End bp | 3398461 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637394383 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | NP_792817 |
Protein GI | 28870198 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.637177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGATGA ATATCCCTAA TCTGATCACC GTACTACGCG TTTTACTGAT TCCGATCTTC ATTTTGCTGT TCTATATGCC TTATCACTGG AGCTACATGG CAGCCAGTGC AGTCTTTGCG TTCGCTGCGG CGACCGACTG GCTCGACGGG TATTTGGCTC GCCGTCTTGA GCAAAGCACG CCATTCGGTG CGTTTCTTGA TCCGGTAGCA GACAAACTGA TGGTGGCCGT GGCCCTGGTG CTGCTGGTTC AGGCGCACGC CAACCTGTGG CTGACCCTGC CGGCAGCGGT GATCATCGGC CGTGAAATCG TGATTTCCGC GCTCCGCGAA TGGATGGCGG AAATAGGCGC GCGTGCACAA GTCGCCGTTT CCAACATGGG CAAATGGAAA ACCGCCGCGC AAATGCTGGC GCTGGTCATT CTGCTCGGCA ACCCGCCGGC AGTCACCTTC TGGGTGATTT TCGGTTACGC ATTGCTGCTC GTCGCAGCGG GGCTGACCCT GTGGTCGATG GTGCAATACC TCAGAGCCGC ATGGCCGCAT CTCAAGACCA CAGCAGAAAA AAAATAA
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Protein sequence | MPMNIPNLIT VLRVLLIPIF ILLFYMPYHW SYMAASAVFA FAAATDWLDG YLARRLEQST PFGAFLDPVA DKLMVAVALV LLVQAHANLW LTLPAAVIIG REIVISALRE WMAEIGARAQ VAVSNMGKWK TAAQMLALVI LLGNPPAVTF WVIFGYALLL VAAGLTLWSM VQYLRAAWPH LKTTAEKK
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