Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3019 |
Symbol | |
ID | 1184675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3393989 |
End bp | 3395158 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394379 |
Product | oxidoreductase, Gfo/Idh/MocA family |
Protein accession | NP_792814 |
Protein GI | 28870195 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.261421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAACG GCAGCAGACG TATTCCCCAA CCGATCCGCT GGGCTATGGT GGGCGGCGGA AGTCAGAGCC AGATCGGCTA CATCCACCGC TGCGCAGCAC TGCGTGACAA TACCTTTGTG TTGGTCGCGG GCGCATTCGA CATCGATCCG ATAAGAGGCA GCGCCTTTGG CGAGCAACTG GGTGTCGATA GCGAACGCTG TTACGCCGAT TACCTGAGTA TGTTCGAACA GGAGGCCCGG CGTGCAGACG GCATTCAAGC GGTCTCGATC GCCACGCCTA ATGGCACGCA TTACTCCATC ACCAAGGCAG CGCTCGAGGC CGGGCTGCAC GTGGTGTGTG AAAAACCCCT GTGTTTCACT GTCGAGCAGG CCGAAAACCT GCGCGAACTT TCGCATAAAC ATAACCGCAT TGTCGGTGTG ACCTACGGGT ATGCCGGCCA TCAACTGATC GAACAGGCCC GGGAAATGAT CGCCGCCGGT GAACTGGGCG ACGTGCGCAT GGTGCACATG CAGTTCGCCC ACGGTTTCCA TAGCGCGCCG GTGGAGGCGC AAAGCCAGGC GACGCAATGG CGTGTCGATC CGCGTCAGGC GGGGCCGAGC TACGTGCTTG GCGATGTCGG AACGCACCCG TTGTACTTGT CGGAAGTGAT GCTGCCTGAC CTGAAAATCA AACGCCTGAT GTGCAGTCGG CAAAGCTTCG TCGCCAGCCG CGCGCCCTTG GAAGACAACG CGTACACCTT GATGGAATAC GAAGGTGGCG CGATGGGCAT GGTGTGGTCG AGCGCGGTCA ATGCAGGCTC CATGCATGGC CAGAAGATCC GCGTCATCGG CTCTCGCGCC AGCCTCGAGT GGTGGGATGA GCGACCTAAC CAGTTGAGCT TTGAAGTTCA GGGGCAGCCC GCGCAAATAC TTGAGCGCGG TATGGGGTAT CTGCACCCCA ATGCGCTGAT AGACGACCGT ATTGGCGGTG GTCACCCGGA AGGCCTGTTC GAAGCATGGG CCAATCTTTA TTACCGCTTT GCCCTGGCCA TGGATGCGAC TGACCGATCC GATACCCAAG CCCTCAGCGC GGTGCGCTAT CCAGGAATAG ACGCTGGCGT CGAAGGCGTG CGATGGGTCG AGCGCTGCGT ACTGTCCGCC GACAACGACT CCATCTGGGT CGCCTATTGA
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Protein sequence | MINGSRRIPQ PIRWAMVGGG SQSQIGYIHR CAALRDNTFV LVAGAFDIDP IRGSAFGEQL GVDSERCYAD YLSMFEQEAR RADGIQAVSI ATPNGTHYSI TKAALEAGLH VVCEKPLCFT VEQAENLREL SHKHNRIVGV TYGYAGHQLI EQAREMIAAG ELGDVRMVHM QFAHGFHSAP VEAQSQATQW RVDPRQAGPS YVLGDVGTHP LYLSEVMLPD LKIKRLMCSR QSFVASRAPL EDNAYTLMEY EGGAMGMVWS SAVNAGSMHG QKIRVIGSRA SLEWWDERPN QLSFEVQGQP AQILERGMGY LHPNALIDDR IGGGHPEGLF EAWANLYYRF ALAMDATDRS DTQALSAVRY PGIDAGVEGV RWVERCVLSA DNDSIWVAY
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