Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3007 |
Symbol | |
ID | 1184663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3381057 |
End bp | 3382640 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637394369 |
Product | amine oxidase, flavin-containing protein |
Protein accession | NP_792804 |
Protein GI | 28870185 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1231] Monoamine oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.306413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACTGA CACGACGCGA AGCGCTGTCC AGCATTGCAG CGGTGGGGGG CGAGAAAGCT CTCAAGGATG CGCTTGCGGT ACTGGGCCTT GGGCCTTCGT CGCATCGACG ACCGCAGCCG CTGAAACTCA AGAATGGGCT GGGGCAGGGC ACCCGTGTGC TGGTGCTCGG CGCCGGGATT GCCGGGCTGG TCACGGCGCT GGAACTGACC CGGGCCGGTT TTACCGTGCA GGTGCTGGAA GCCCGTGATC GGGTGGGCGG CCGTAACTGG ACCCTGCGCA ACGGTGATCG GGTGGACTAC AAGGACGGCC GCACACAGAC CGTGGCCTTT GATCCGGGCC TGTATTTCAA CGCAGGGCCC GCGCGTATTC CCAGCCAGCA TCGCACGTTG CTCGACTATT GCAGCGAACT GGGCGTGCCG CTGGAAGTGC TGGTCAACAG CAGTCACGGC GCTCAGGTAC GCCCGGACCT GCAACAGCCG GCTTTCACCG TCGGCCAGGC CATCAACGAT GCGCGTGGTC ATCTTTCAGG GTTACTGGCC ACGGCGGTGC AACGCGATGC CCTGGACGAT GTGTTGAGCG GTGAAGAGCG TCAGCGCCTG TTGGCGTTTT TGCAAGTGTA TGGCGACCTG TCGCAGGAAT TGGCCTATGA GGGCAGCCTG CGTTCCGGTC ATCAGGAGTC GCTCTCGCAC CCAGGAGCAT TGCCGACCAG CGCGCAGCCG ATCGCGCTCG ACCGGCTGTT GCACCCCGAG CTGTGGGGGG CCTTGCTGCA CACTGAATTC CCGGAGTTTT CGGCCACCAT GTTTCAGCCG GTAGGCGGCA TGGACCGCAT CACCGACGCC TTCTACCAGC GTCTCACCGA GCAGGTGCAA CTGGGCGCGC AGGTGCGCCG GATTCGTCAG TTTGAAGACG GCGTAGCCGT GACCTATCAC GACAGCCACA GCGGTCGCGA ACAGGTGGTG CGCGCCGATT ATCTGGTCTC GACGTTGCCG TTGCCGCTGT TGGCGAGGCT CGACACCGAT TTCAGCGACC CGATCAAAGC CGCCTTGCTC AGCACCCGCA ACGATCAGGC GACCAAAGTG GCGTGGCAAT CTCCGCGCTT CTGGGAAACT GATTACCGCA CCTATGGCGG GTTGTCCTGG ATCGACCATC CGGCGCGCCT GCTGTGGTAC CCGAGCAACG ACCTCAATAC CCGCGATGGC CTGCTCGTCG CCGGTTACGT GACCGGGGAG GGCGCCGATG TGTTCGGCGC CAAACCGTTC GACGCGCAGT ACGCAACGTC CAGAGAAGCC GTGGAACTGC TGCATCCCGG TTACTCGCAT CATTTGCGCA ACCCGCTGGC AGTGTCCTGG GAGCAGATCC CGTACAGCGA AGGCCCGTGG CTGCAACGCG AGCATTTTCC GGCTGACGCC AGCGCCTTGC TGGAAGCGCC CCATGGCCGG GTCTATTTCG CCGGCGACGG GCTGGTGCAG AGCGGCGTGG GTATCTGGCA GGAATCGGCC GCCAACTCGG CGCGCTATGT GGTCGGGCAA CTGGCCGAGC GCGTCATCCA GCAAAGACAG ACTGCGGCCC TCGCTGCGTC TTGA
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Protein sequence | MGLTRREALS SIAAVGGEKA LKDALAVLGL GPSSHRRPQP LKLKNGLGQG TRVLVLGAGI AGLVTALELT RAGFTVQVLE ARDRVGGRNW TLRNGDRVDY KDGRTQTVAF DPGLYFNAGP ARIPSQHRTL LDYCSELGVP LEVLVNSSHG AQVRPDLQQP AFTVGQAIND ARGHLSGLLA TAVQRDALDD VLSGEERQRL LAFLQVYGDL SQELAYEGSL RSGHQESLSH PGALPTSAQP IALDRLLHPE LWGALLHTEF PEFSATMFQP VGGMDRITDA FYQRLTEQVQ LGAQVRRIRQ FEDGVAVTYH DSHSGREQVV RADYLVSTLP LPLLARLDTD FSDPIKAALL STRNDQATKV AWQSPRFWET DYRTYGGLSW IDHPARLLWY PSNDLNTRDG LLVAGYVTGE GADVFGAKPF DAQYATSREA VELLHPGYSH HLRNPLAVSW EQIPYSEGPW LQREHFPADA SALLEAPHGR VYFAGDGLVQ SGVGIWQESA ANSARYVVGQ LAERVIQQRQ TAALAAS
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