| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3004 |
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| Symbol | xylG |
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| ID | 1184660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3377835 |
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| End bp | 3379421 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394366 |
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| Product | D-xylose ABC transporter, ATP-binding protein |
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| Protein accession | NP_792801 |
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| Protein GI | 28870182 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.271477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACT ACCTGCTGCA AATGAACGGC ATCGTCAAAA CCTTTGACGG TGTCAAAGCG
CTCAACGGCA TCGATATCAA GGTACGCCCC GGTGAATGCG TCGGCCTTTG CGGCGAAAAC
GGCGCGGGCA AATCCACCTT GATGAAAGTG CTCTCGGCGG TCTATCCCTA CGGCACCTGG
GAAGGCGAGA TTCTCTGGGA CGGCAACCCT CTCAAGGCGC AGTCCATCAG CGAAACCGAA
GCCGCCGGAA TCGTCATCAT TCATCAGGAA CTGACTCTGG TCCCCGACCT GTCAGTGGCC
GAAAACATCT TCATGGGCCA CGAACTGACC CTGCGCGGCG GGCGCATGAA CTACCCGGCG
ATGATCCACC GTGCCGAAAC CCTGATGCGT GAGCTCAAAG TGCCTGACAT GAACGTGGCG
CTGCCGGTTT CGCAGTACGG CGGTGGCCAT CAGCAATTGG TGGAAATCGC CAAGGCGCTG
AACAAACAGG CACGACTGTT GATCCTCGAT GAGCCCTCCT CGGCCCTGAC CCGCTCGGAG
ATTGAGGTCC TGCTGGGCAT CATTCACGAC CTCAAGGCCA AAGGCGTGGC CTGCGTATAC
ATCTCGCACA AACTCGATGA AGTGGCGGCC GTGTGCGACA CCATTTCGGT GATCCGCGAT
GGCAAGCACA TTGCTACTAC CGCTATGGCT GAAATGGACA TCCCGAAGAT CATCACCCAG
ATGGTCGGGC GTGAAATGAG CAACCTCTAC CCTACCGACG CGCATGACAT CGGCGAGGTG
ATTTTCGAGG CGCGCAACAT CACCTGCTAC GACGTCGACA ACCCCAAACG CAAACGGGTG
GACGACATTT CGTTTGTCCT CAAGCGCGGG GAAATCCTCG GCATCGCCGG GCTGGTGGGC
GCTGGTCGCA CAGAGCTGGT CTCGGCGCTG TTTGGTGCTT ATCCAGGTCG CTACAGCGGT
GAGGTCTGGC TGGACGGCCA GCCGGTCGAT ACCCGCACAC CGCTCAAATC AATCCGCGCC
GGCCTGTGTA TGGTCCCGGA AGACCGCAAG CGCCAGGGCA TCATCCCCGA CATGGGCGTC
GGCCAGAACA TCACCCTCGC CGTCCTCGAC AACTACTCGA AAATGACCCG CATCGACGCA
GAAGCCGAAT TGGGCAGCAT TGACCGGGAA ATTTCGCGCA TGCACCTCAA GACGGCCAGC
CCGTTTCTGC CGATCACCAG TCTTTCCGGC GGCAACCAGC AGAAAGCCGT GCTGGCCAAG
ATGCTCTTGA CCAGGCCCCG CGTGCTGATT CTCGATGAGC CGACGCGCGG GGTCGATGTG
GGTGCCAAGT ACGAGATCTA CAAGCTGATG GGTGCGTTGG CGGCCGAGGG CGTGGCGATC
ATCATGGTGT CCTCGGAGCT GGCCGAAGTG CTGGGGGTTT CCGACCGCGT GCTGGTCATT
GGTGAGGGCC GCTTGTGCGG CGATTTTATC AACCATGAAC TCACTCAGGA GCAGGTGCTT
GCCGCCGCAC TCAGCCACCC CGGCGACCCT GACAGTAATG ACCCTGCCAA CAATAATCAT
AACGACAACG ACCGGAAGAC CACGTAG
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| Protein sequence | MSDYLLQMNG IVKTFDGVKA LNGIDIKVRP GECVGLCGEN GAGKSTLMKV LSAVYPYGTW
EGEILWDGNP LKAQSISETE AAGIVIIHQE LTLVPDLSVA ENIFMGHELT LRGGRMNYPA
MIHRAETLMR ELKVPDMNVA LPVSQYGGGH QQLVEIAKAL NKQARLLILD EPSSALTRSE
IEVLLGIIHD LKAKGVACVY ISHKLDEVAA VCDTISVIRD GKHIATTAMA EMDIPKIITQ
MVGREMSNLY PTDAHDIGEV IFEARNITCY DVDNPKRKRV DDISFVLKRG EILGIAGLVG
AGRTELVSAL FGAYPGRYSG EVWLDGQPVD TRTPLKSIRA GLCMVPEDRK RQGIIPDMGV
GQNITLAVLD NYSKMTRIDA EAELGSIDRE ISRMHLKTAS PFLPITSLSG GNQQKAVLAK
MLLTRPRVLI LDEPTRGVDV GAKYEIYKLM GALAAEGVAI IMVSSELAEV LGVSDRVLVI
GEGRLCGDFI NHELTQEQVL AAALSHPGDP DSNDPANNNH NDNDRKTT
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