| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3000 |
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| Symbol | |
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| ID | 1184656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3373117 |
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| End bp | 3373884 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637394362 |
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| Product | papain cysteine protease family protein |
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| Protein accession | NP_792797 |
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| Protein GI | 28870178 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4870] Cysteine protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.131276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTATA CCGTGAAACA GTATGGATGG ATTCGCGATC TGCCTGATCA TCGCGATCAT
CTGTATGCTG CCCCGACAGC CGCACTGGCG GCGCTCCCAC ACGCAATTGA TCTGCGTCCT
CATTGCCCGC CCGTATACGA TCAGGGCCAA CTGGGCAGTT GTACGGCGAA CGGTATTGCA
GGCGCTATTC AGTTTGATCG CATGAAGCAG AAGCTCACGC CGGCGTTCGT GCCCTCGCGA
TTGTTTATTT ATTACAACGA ACGTGTGATT GAACACACCG TCGAGTCGGA CAGTGGCGCG
ATGATCCGCC ACGGCATCAA AAGTGTAGCG AAGCAAGGTG ATTGCCCTGA AAAGGAGTGG
CCTTACGATA TTGAAAAGTT CGCTGTCAAA CCGTCGCCCG CCTGCTACAA GGACGCACGA
AAATACAAGG CAGTGTCCTA CCAGAAAGTT GCGCAAAACC TCAACCAGAT GAAAGGCTGC
CTGGCGGCGG GGTATCCGTT TGTCATTGGC TTTTCCGTCT ACGAAAGCTT TGAAAGCAAG
AAAGTTGCCC AGACCGGGCA TGCCCCCATG CCCGGCCCCC ACGAAAAGAT GCTGGGAGGG
CACTGTGTGC TGGCTGTGGG TTACAACGAT GCCCACCAGC ATTTCATCTT GCGCAACTCA
TGGGGCGTTG GTTGGGGCAT GGAGGGCTAC TTCACCCTGC CCTACAGCTA TTTGCTGGAC
GAGAATCTGT CCACAGACTT CTGGACGATA AGGGTGGTGG CTGCCTGA
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| Protein sequence | MTYTVKQYGW IRDLPDHRDH LYAAPTAALA ALPHAIDLRP HCPPVYDQGQ LGSCTANGIA
GAIQFDRMKQ KLTPAFVPSR LFIYYNERVI EHTVESDSGA MIRHGIKSVA KQGDCPEKEW
PYDIEKFAVK PSPACYKDAR KYKAVSYQKV AQNLNQMKGC LAAGYPFVIG FSVYESFESK
KVAQTGHAPM PGPHEKMLGG HCVLAVGYND AHQHFILRNS WGVGWGMEGY FTLPYSYLLD
ENLSTDFWTI RVVAA
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