| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2987 |
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| Symbol | |
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| ID | 1184643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3358253 |
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| End bp | 3359584 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394349 |
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| Product | hypothetical protein |
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| Protein accession | NP_792784 |
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| Protein GI | 28870165 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.156171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACC GAAAATCCCT GTTGCGTCTG GCCCTTGGTC TGGCATTGCT GGGTTCAGGT
CTGATCGCAA CGGCGCAAGC CGCCAATGAG CAATACTTCC CGCTGCAGAG CTACCGGGTC
GGCCCGTATG CAGCGGGCGG CACCGGGTTT TTTGGTGGTT TTATCGACTA CCTGCAATAC
GTCAACGCCA ACGGCGGAGT CAACGGCGTC ACATTGACCT GGTCGGAGTG CGAAACCGAA
TACGTGGTGG AGAAGGGCGT CGAATGCTAC GAGCGGCTCA AGGGCGGGCT CAATGGTGCA
CCGGCTGCCG CCACCAATCC GCTTTCTGTG GGGATCGCCT ACGCCACACT GGAGCGCTCC
ACCGCCGACA AGTTGCCGCT GATCACCATT AACCACGGGC GCACGGATTC CACCGACGGC
AGCGTGTTTG CGTATGTGTT CCCGTTACAG CTGAACCCGT ATTCGGAAGT GTCGGCCATC
GTCAATTACA TCGGTCAGCG TGAAGGCGGG CTGGCGTCGC TCAAGGGCAA GAAAATCGCC
GTGCTTTACC ACGGCTCGCC TTATGGCAAG GAAACCAATG GTGTGCTGGA AACCCTGGCA
AAGAATTACG GCTTTGAATT GACCACACTG GAAGTGCCGC ACCCTGGCAA CGAACAACAA
TCGCAGTGGT TGAACATTCG TCGTCTCAAG CCCGATTGGG TGATCCTGCG CGGTTGGGGG
GTGATGAACC CGGTGGCGTT GAAATCGGCG CAGAAGGTCG GTTTTCCGGT TGACCATATC
ATTGGCAACA TCTGGAGCAA CTCCGAAGAA GACGTGATCC CTGCCGGTGC GGCCGCCAAG
GGCTTCATCT CGATCACTAC GCATCCGTCC GGCACCGACT TCCCGGTGCT GCAAGGCATC
AAGACGGCCG TGCTCGACAA GGGCCAGGGC AACCTTTCCG ACCCCAGGCG CTTCGGCACG
GTGTATTACA ACCTTGGCGT GGTGAACGGC ATCCTCAACG TTGAGGCGCT GCGCATCGCT
CAAGCCCGAT TTGGTAACAA GCCGCTGACC GGTGAGCAGG TCCGCTGGGG CTTCGAGCAC
CTGAATCTGG ACGACGCGCG TTTGCAGGCG CTGGGTGCCA AAGGGCTGGT GCAGCCACTG
AAACTGTCCT GTGCGGACCA CGAGGGCGGC GGTGCGGTGC GCTTTCAGCA ATGGGACGGC
CAGCGCTGGA TCCTGATCAG TGACTGGATT CAGGCAGATC GCGCCTTGCT GCGGCCTATC
ATCGAAGCGT CGGCTGCGCA GTACGCCAAG GAAAAAGGCA TCACTGCTCG CGATTGCAGC
AAGGAGCAAT GA
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| Protein sequence | MKHRKSLLRL ALGLALLGSG LIATAQAANE QYFPLQSYRV GPYAAGGTGF FGGFIDYLQY
VNANGGVNGV TLTWSECETE YVVEKGVECY ERLKGGLNGA PAAATNPLSV GIAYATLERS
TADKLPLITI NHGRTDSTDG SVFAYVFPLQ LNPYSEVSAI VNYIGQREGG LASLKGKKIA
VLYHGSPYGK ETNGVLETLA KNYGFELTTL EVPHPGNEQQ SQWLNIRRLK PDWVILRGWG
VMNPVALKSA QKVGFPVDHI IGNIWSNSEE DVIPAGAAAK GFISITTHPS GTDFPVLQGI
KTAVLDKGQG NLSDPRRFGT VYYNLGVVNG ILNVEALRIA QARFGNKPLT GEQVRWGFEH
LNLDDARLQA LGAKGLVQPL KLSCADHEGG GAVRFQQWDG QRWILISDWI QADRALLRPI
IEASAAQYAK EKGITARDCS KEQ
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