| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2981 |
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| Symbol | |
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| ID | 1184636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3350706 |
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| End bp | 3351389 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637394342 |
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| Product | isochorismatase family protein |
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| Protein accession | NP_792778 |
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| Protein GI | 28870159 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0757911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCAAGCC CAACCAGCCT GTCAGGCATA ACCGAGGTAA ACCCGATGAG CAAGCCCCTT
GTGCAATGGC CAATCAACCC GCGCAGAACC GCAGTCATCG TCGTCGACAT GCAAAAAGTC
TTCTGCGAGC CGCATGGCGC GTTGTACGTC AAAAGCACGG CTGACATCGT CAGGCCTGTC
CAGACGCTGC TTTGCGCCGC ACGTGCCGCT CAGGTGATGG TGGTCTATCT GCGCCATACA
GTACGTGGCG ATGGTTCGGA TACCGGACGT ATGCGCGACC TTTATCCGAA TGTGGACCAG
ATCCTTGCGC GCCACGACCC AGATGTCGAA ATCATTGATG CGCTTGCGCC CGAGTCGGGC
GATGTGATCA TCGACAAGCT GTTTTACAGC GGCTTTCACA ATACTGACCT GGACACGGTA
TTGCGCGCCA GAGACGTCGA TACAATCATT ATTTGCGGGA CGGTAACCAA TGTGTGTTGT
GAAACCACCA TCAGGGATGG CGTGCACCGT GAATACAAGG TTATCGCGCT GAGTGACGCA
AACGCGGCGA TGGATTACCC GGATGTAGGG TTTGGCGCTG TTTCGGCCGA AGAGGTTCAG
CGTATCTCGT TGACAACGAT TGCCTACGAG TTTGGCGAGG TCACTACCAC GGCGGACGTT
ATCCGACGTA TCGAAGGCGC ATAG
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| Protein sequence | MASPTSLSGI TEVNPMSKPL VQWPINPRRT AVIVVDMQKV FCEPHGALYV KSTADIVRPV
QTLLCAARAA QVMVVYLRHT VRGDGSDTGR MRDLYPNVDQ ILARHDPDVE IIDALAPESG
DVIIDKLFYS GFHNTDLDTV LRARDVDTII ICGTVTNVCC ETTIRDGVHR EYKVIALSDA
NAAMDYPDVG FGAVSAEEVQ RISLTTIAYE FGEVTTTADV IRRIEGA
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