| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2980 |
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| Symbol | |
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| ID | 1184635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3349467 |
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| End bp | 3350480 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394341 |
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| Product | oxidoreductase, 2OG-Fe(II) oxygenase family |
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| Protein accession | NP_792777 |
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| Protein GI | 28870158 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00391841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTGC AATATGTGCC CATCATTAAC CTGGCCCCTT ATTTTTCAGG AGAACCGGAC
GGCAAGGCAG CCGTGGCGCA GGCAGTCAAC CAGGCGTGCA AGGACATCGG GTTTCTGGTG
ATCACCGAAC ACCAGATTCC CACAGAATTG ATTGAGCGAG TCTCGCGCCT GACCCGACAG
TTCTTCGATC TGCCGCTCGC GGAAAAGCGC AAGGTCGACC GGCCCAGTCC GGAAATGGTG
CGTGGTTACA GTGCAGTGGC CGAGGAAAGC CTGTCGTATT CTCTCGAAGA AAGTGCGCCG
GGCGATCTCA AGGAGTCCTT CTCCATCGGG CCGAGCGATG TACCGAATGA AGACTATTAC
CATAACGCCG AGGCAGGCCC GCACTTTGCG CCTAACGTCT GGCCGGCCGA TGAGCGTGTG
CCCGGATTTC AGGAGGCTTA TCGAGCGTAT TTCGACGCGA TGAGCCAGTT GGCCCAGTCA
TTGATGCGCT TATTCGCATT GGCACTGGAG CTGGACGAGT ACTTTTTCGA CGACAGGATC
GATCGCCATA TCAGCATGTT CCGCAGCCTC AGCTATCCGG ACATCAAGAC CGAAGTCGAG
GCAGGGCAAT TGCGCGCCAG TGCGCACACT GATTACGGCA GCCTGACCAT CGTGCGCCCC
GACAATGCGC TGGGTGGTTT GCAGGTGCGC AATCAGCAGG GCGAGTGGGT CGATGTGCCC
TATGTCGAGA ACGGTTTCGT GGTCAACATC GGCGATCTGA TGATGCAATG GACCAACGAC
CAGTGGATTT CTACTTTGCA CCGCGTGGTC AACCCGCCCA TGGCCAGCGA GCAGGACAAC
CGTCGGCAAT CGCTGGTGTT CTTCCACCAG CCCAACTACG ACACCTTGAT CGAGTGTCTG
CCCGGTTGCC TGTTGCCTGA CGCAACGCCT CGCCATGCGC CAGTCACCTC GGGCGATCAC
TTGTTGGCCA AGTTCGTCAA ACAGACGACG TTCGGCGGCA GCAAGGTGGC CTGA
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| Protein sequence | MTLQYVPIIN LAPYFSGEPD GKAAVAQAVN QACKDIGFLV ITEHQIPTEL IERVSRLTRQ
FFDLPLAEKR KVDRPSPEMV RGYSAVAEES LSYSLEESAP GDLKESFSIG PSDVPNEDYY
HNAEAGPHFA PNVWPADERV PGFQEAYRAY FDAMSQLAQS LMRLFALALE LDEYFFDDRI
DRHISMFRSL SYPDIKTEVE AGQLRASAHT DYGSLTIVRP DNALGGLQVR NQQGEWVDVP
YVENGFVVNI GDLMMQWTND QWISTLHRVV NPPMASEQDN RRQSLVFFHQ PNYDTLIECL
PGCLLPDATP RHAPVTSGDH LLAKFVKQTT FGGSKVA
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