Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2980 |
Symbol | |
ID | 1184635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3349467 |
End bp | 3350480 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394341 |
Product | oxidoreductase, 2OG-Fe(II) oxygenase family |
Protein accession | NP_792777 |
Protein GI | 28870158 |
COG category | [R] General function prediction only |
COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00391841 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTGC AATATGTGCC CATCATTAAC CTGGCCCCTT ATTTTTCAGG AGAACCGGAC GGCAAGGCAG CCGTGGCGCA GGCAGTCAAC CAGGCGTGCA AGGACATCGG GTTTCTGGTG ATCACCGAAC ACCAGATTCC CACAGAATTG ATTGAGCGAG TCTCGCGCCT GACCCGACAG TTCTTCGATC TGCCGCTCGC GGAAAAGCGC AAGGTCGACC GGCCCAGTCC GGAAATGGTG CGTGGTTACA GTGCAGTGGC CGAGGAAAGC CTGTCGTATT CTCTCGAAGA AAGTGCGCCG GGCGATCTCA AGGAGTCCTT CTCCATCGGG CCGAGCGATG TACCGAATGA AGACTATTAC CATAACGCCG AGGCAGGCCC GCACTTTGCG CCTAACGTCT GGCCGGCCGA TGAGCGTGTG CCCGGATTTC AGGAGGCTTA TCGAGCGTAT TTCGACGCGA TGAGCCAGTT GGCCCAGTCA TTGATGCGCT TATTCGCATT GGCACTGGAG CTGGACGAGT ACTTTTTCGA CGACAGGATC GATCGCCATA TCAGCATGTT CCGCAGCCTC AGCTATCCGG ACATCAAGAC CGAAGTCGAG GCAGGGCAAT TGCGCGCCAG TGCGCACACT GATTACGGCA GCCTGACCAT CGTGCGCCCC GACAATGCGC TGGGTGGTTT GCAGGTGCGC AATCAGCAGG GCGAGTGGGT CGATGTGCCC TATGTCGAGA ACGGTTTCGT GGTCAACATC GGCGATCTGA TGATGCAATG GACCAACGAC CAGTGGATTT CTACTTTGCA CCGCGTGGTC AACCCGCCCA TGGCCAGCGA GCAGGACAAC CGTCGGCAAT CGCTGGTGTT CTTCCACCAG CCCAACTACG ACACCTTGAT CGAGTGTCTG CCCGGTTGCC TGTTGCCTGA CGCAACGCCT CGCCATGCGC CAGTCACCTC GGGCGATCAC TTGTTGGCCA AGTTCGTCAA ACAGACGACG TTCGGCGGCA GCAAGGTGGC CTGA
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Protein sequence | MTLQYVPIIN LAPYFSGEPD GKAAVAQAVN QACKDIGFLV ITEHQIPTEL IERVSRLTRQ FFDLPLAEKR KVDRPSPEMV RGYSAVAEES LSYSLEESAP GDLKESFSIG PSDVPNEDYY HNAEAGPHFA PNVWPADERV PGFQEAYRAY FDAMSQLAQS LMRLFALALE LDEYFFDDRI DRHISMFRSL SYPDIKTEVE AGQLRASAHT DYGSLTIVRP DNALGGLQVR NQQGEWVDVP YVENGFVVNI GDLMMQWTND QWISTLHRVV NPPMASEQDN RRQSLVFFHQ PNYDTLIECL PGCLLPDATP RHAPVTSGDH LLAKFVKQTT FGGSKVA
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