| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2976 |
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| Symbol | |
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| ID | 1184630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3344968 |
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| End bp | 3346023 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394336 |
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| Product | DNA topoisomerase, type I, putative |
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| Protein accession | NP_792773 |
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| Protein GI | 28870154 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0896688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGACT CGACTGCCAT CAGCCCGCCC GCCAGTGACC TGCATTACGT AGACGACACT
CAACCGGGCC TGACCCGCAA GATACTGCGC GAAAAATTTG CCTACTTCGA CACCCAGGGC
AAGCGCATCA AGGACGAGTC GGAGATCAAG CGCATCAACG CACTGGCAGT TCCACCCGCC
TACACCGATG TGTGGATCTG CGCCGACCCG ATGGGTCATC TGCAGGCCAC CGGGCGCGAC
GCTCGTGGTC GCAAACAGTA TCGCTACCAC CCGCGCTGGC GCGAGATTCG TGATCAGGAC
AAATATTCGC GCCTGATCGA GTTCGGCCAC GCGCTGCCCA AGGTGCGCAA GCAGATCGAA
GCGCAGCTCG CGCAGCCGGG CATGGGTCGG GAAAAGGTCA TGGCGACGGT TATTTCACTG
CTCGACGCGA CACTGATCCG CATCGGTAAC AGCCAGTACG CCAAGGAAAA CCGCTCTTAC
GGCCTGACCA CCCTGCGCAA CAAGCATGTG GAGGTCAAAG GCGGTCAGAT TCTCTTCGAG
TTCCGCGGTA AAAGCGGCGT CGAACACAAG GTCAGCGTCA AAGACCGGCG CCTGGCCGGT
GTCATCAAGC GCTGCATGGA ACTGCCGGGG CAGAACCTGT TCCAGTATCT GGACGACGAC
GGCGTGCGCC ATGCCGTGAC CTCCTCCGAC ATCAACGCCT ACCTGCAAAG CCTCACCGGC
TCGGACTTCA CCGCCAAGGA CTACCGAACC TGGGCCGCCA GCGCACTCGC ACTCGCCACC
CTGCAAAAGC TGCATTGGGA GCCGGAAGCC GACGCCAAGC GGCACATCGT CGACATGGTA
AAGGCCGTTT CCAAACAACT GGGCAATACC CCGGCCATCT GCCGCAAATG CTACATCCAT
CCAGCGGTGC TGGAAGGCTT CCTGCTCGGC AACCTGGCCA AACTTCCCCG CTCAAGGCAG
CGCAAAGGCT TGCGCCTGGA AGAAGTCGCG CTGGCCAGTT ACCTGCGAAT TCTTGCCGAC
AAGGTCGAAG CCGTGGTGAA AGAAAGCAAA GCGTGA
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| Protein sequence | MPDSTAISPP ASDLHYVDDT QPGLTRKILR EKFAYFDTQG KRIKDESEIK RINALAVPPA
YTDVWICADP MGHLQATGRD ARGRKQYRYH PRWREIRDQD KYSRLIEFGH ALPKVRKQIE
AQLAQPGMGR EKVMATVISL LDATLIRIGN SQYAKENRSY GLTTLRNKHV EVKGGQILFE
FRGKSGVEHK VSVKDRRLAG VIKRCMELPG QNLFQYLDDD GVRHAVTSSD INAYLQSLTG
SDFTAKDYRT WAASALALAT LQKLHWEPEA DAKRHIVDMV KAVSKQLGNT PAICRKCYIH
PAVLEGFLLG NLAKLPRSRQ RKGLRLEEVA LASYLRILAD KVEAVVKESK A
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