Gene PSPTO_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2969 
Symbol 
ID1184623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp3338318 
End bp3338806 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content58% 
IMG OID637394329 
Producthypothetical protein 
Protein accessionNP_792766 
Protein GI28870147 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0448916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATGTG GGGTTCGTGG ATCGGATACG TTCTATCACT ACTTCCCCAG CAAAGAGGCC 
TTTGGCCGGG CAGTGCTGGA AGAATATTCG CGTTATTTCG CCCAACGCCT GGACCGCTGG 
CTGCTGGACG AAGCGCTGTC GCCACTGGAA CGGCTGGTCG GTTTCGTTCA GAGCGCCAAG 
CACGGCATGG CCCGACACGA CTATCGGCGC GGGTGCATGG TCGGCAATCT GGGTCAGGAA 
GTCGGCCTGT TGCCGGAAGG GTTTCGCGGC ACGCTGGAAC AGATTTTCCT CGATTGGCAG 
TCGAAACTGG CCGCTTGCCT GAGCGCTGCA CAAGCCTGTG GCGAATTGTC CAGGCGCGCT 
GACTGCAACG AATTGGCGGC TTTTTTCTGG ATCGGCTGGG AAGGAGCGGT GCTTCGCGCG 
CGGCTGGTCA AAAGTGACAA TCCATTGAAC ACCTTTATTG CCGGCTATCT TCGTGGCTTG 
CCGCAATGA
 
Protein sequence
MKCGVRGSDT FYHYFPSKEA FGRAVLEEYS RYFAQRLDRW LLDEALSPLE RLVGFVQSAK 
HGMARHDYRR GCMVGNLGQE VGLLPEGFRG TLEQIFLDWQ SKLAACLSAA QACGELSRRA 
DCNELAAFFW IGWEGAVLRA RLVKSDNPLN TFIAGYLRGL PQ