Gene PSPTO_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2967 
Symbol 
ID1184621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3336803 
End bp3337246 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content63% 
IMG OID637394327 
Producthypothetical protein 
Protein accessionNP_792764 
Protein GI28870145 
COG category 
COG ID 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00967435 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCCTGG CGACCCAATC CATTGCACGT CGTAAAGCGG CTGCCGGTTT CTGGCTGTTG 
GCCCATCAGG TCAGCCAGCG CAGCGAAGCC GAGAGACTGG CGAACATCCG GGCTGGTTTT
GCGCCCGGCT GGATACGCGC CGTACGCGAC GCGCTCAGCC TTTGCCCGCA GCAAATGGAA
GCGTTGTTTA ACGCGTCGAT GTCAACGCTG GAACGCCGCC AGCGTCAGCA GCAGCCGTTG
AGTCTGGTGG CCTCGGAGCG TCTGGATCGC GTCGCGATGA TTGCCAGTCA CGCCATGCGC
GTGTTTGAAA CACCCGAGCG CGCTGGCAAA TGGCTGATCA CCCGCAATAC GGCACTGGGT
GGTCACACGC CGTTGCACTT ATGCGACACC GGAATTGGCA GCGCTCAGGT GCAGCAGGCG
CTTGAAGCCT GCGAGCGAGC CTGA
 
Protein sequence
MTLATQSIAR RKAAAGFWLL AHQVSQRSEA ERLANIRAGF APGWIRAVRD ALSLCPQQME 
ALFNASMSTL ERRQRQQQPL SLVASERLDR VAMIASHAMR VFETPERAGK WLITRNTALG
GHTPLHLCDT GIGSAQVQQA LEACERA