Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2967 |
Symbol | |
ID | 1184621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3336803 |
End bp | 3337246 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637394327 |
Product | hypothetical protein |
Protein accession | NP_792764 |
Protein GI | 28870145 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00967435 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCCTGG CGACCCAATC CATTGCACGT CGTAAAGCGG CTGCCGGTTT CTGGCTGTTG GCCCATCAGG TCAGCCAGCG CAGCGAAGCC GAGAGACTGG CGAACATCCG GGCTGGTTTT GCGCCCGGCT GGATACGCGC CGTACGCGAC GCGCTCAGCC TTTGCCCGCA GCAAATGGAA GCGTTGTTTA ACGCGTCGAT GTCAACGCTG GAACGCCGCC AGCGTCAGCA GCAGCCGTTG AGTCTGGTGG CCTCGGAGCG TCTGGATCGC GTCGCGATGA TTGCCAGTCA CGCCATGCGC GTGTTTGAAA CACCCGAGCG CGCTGGCAAA TGGCTGATCA CCCGCAATAC GGCACTGGGT GGTCACACGC CGTTGCACTT ATGCGACACC GGAATTGGCA GCGCTCAGGT GCAGCAGGCG CTTGAAGCCT GCGAGCGAGC CTGA
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Protein sequence | MTLATQSIAR RKAAAGFWLL AHQVSQRSEA ERLANIRAGF APGWIRAVRD ALSLCPQQME ALFNASMSTL ERRQRQQQPL SLVASERLDR VAMIASHAMR VFETPERAGK WLITRNTALG GHTPLHLCDT GIGSAQVQQA LEACERA
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