| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2947 |
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| Symbol | |
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| ID | 1184601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3310822 |
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| End bp | 3312036 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637394308 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_792745 |
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| Protein GI | 28870126 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.213045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGTC CACTGCGTCG CTCGACGCTG ACCATCGTTT TGTGTTTCAT CGTTGCGCTG
ATCGAAGGGT TCGACCTGCA GGCTGCCGGA ACAGCGGCTG CGGGACTGCG CCAGACCTTC
GCCCTTGACC CGAAAATGAT GGGCTGGGTG TTCAGCGCCG GGATCATCGG GTTGCTGCCG
GGCGCTTTTT TCGGTGGCTG GATCGCTGAC CGTATCGGCC GCAAGAAAAT CCTCGTGGCC
GCGGTGCTGC TGTTCGGGGT CTTTTCGCTG AGTACGGCCT ACGTGCAGAC CTTTTCCGGC
CTGCTGCTGG TGCGTTTCAT GACCGGTCTG GGGCTGGGGG CCGCGCTGCC CAATCTTATC
GCCTTGTGCG CCGAAGCCGT CAGCGAGCGC CACCGCGGGC TCGCCATCAG CGTCATGTAC
GCAGGCGTTC CGCTGGGTGG CGCGCTGGCT GCGGTGGTGG CGATGTTTAC CAGCGAGCAT
TGGCAGACCA CCTTCATCAT CGGTGGCCTG GTGCCGTTGC TGGTGGTCCC GCTAATGATG
CTGTTGCTGC CCGAATCCAG CGCCTTTAGC CAGCAGACAA GCGCACGCAG CGTTCGCCAC
TCGACGGCCA CCGCACTGTT TGGCGAAGGC CGGGCGCGCA CGACACTGGC ATTGTGGGCC
GGCTATTTCT TTACCCTGAC GGTCATGTAC ATGCTGCTCA ACTGGTTGCC GTCGCTGCTG
ATCGGCCAGG GCTTCAGTAA ACCGCAGGCG GGCATGGTAC AGATGCTGTT CAACATTGGC
GGCGCATCGG GTTCTTTGCT CGGCGGGCTG TTGCTGGATC GCTGCAACGG CATCAAGGTC
GTGATGTTCG TCTATGCCGG TTTGCTGCTG GCACTGACAG GCGTAGGTTT TTCGGTGGGT
ATCGTGCCGA TGGCGGCGGC CGGCTTTTGC GCCGGGGTGT TTGTCATGGC CGCGCAACTG
GTGCTCTACG CGTTGGCCCC ACCCTCCTAC CCGACCTCGG TACGCGCGAC CGGCGTCGGC
GCTGCCGTAG CCATCGGCCG CCTGGGTTCT GTGGCAGGCC CCTTGGCCGC CGGGCAGTTG
CTGGGTGCCG GCGCGGGAAC AGCCGGCGTG CTGCTGGCAA CCTCGCCAGG CCTGGTGATC
GCCGCGCTGG CAGCAATCAG TGTGCTGTCA CGCTCGACGG CAACCGAGAA GCGTCAGCTC
AAGGTTGCCC GTTAA
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| Protein sequence | MTSPLRRSTL TIVLCFIVAL IEGFDLQAAG TAAAGLRQTF ALDPKMMGWV FSAGIIGLLP
GAFFGGWIAD RIGRKKILVA AVLLFGVFSL STAYVQTFSG LLLVRFMTGL GLGAALPNLI
ALCAEAVSER HRGLAISVMY AGVPLGGALA AVVAMFTSEH WQTTFIIGGL VPLLVVPLMM
LLLPESSAFS QQTSARSVRH STATALFGEG RARTTLALWA GYFFTLTVMY MLLNWLPSLL
IGQGFSKPQA GMVQMLFNIG GASGSLLGGL LLDRCNGIKV VMFVYAGLLL ALTGVGFSVG
IVPMAAAGFC AGVFVMAAQL VLYALAPPSY PTSVRATGVG AAVAIGRLGS VAGPLAAGQL
LGAGAGTAGV LLATSPGLVI AALAAISVLS RSTATEKRQL KVAR
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