Gene PSPTO_2945 details

Gene Information

• Locus tag: PSPTO_2945
• ID: 1184599
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 3308615
• End bp: 3309103
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637394306
• Product: transcriptional regulator, MarR family
• Protein accession: NP_792743
• Protein GI: 28870124
• COG category: [K] Transcription
• COG ID: [COG1846] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.521959
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAGC CATCCGACAG CGCCGACATT TGCCAGGCTC CTGTACAGAC TGCCCAGGCA 
CCGTTGCCGA AGGATTCTGC ACTCGATGAC CTGATCGGTT ATGCCATGCG CCGGGCACAG 
CTCAAGCTGT TCCAGAACCT GATCGGACGT CTTTCCGCCC ACGACCTGCG CCCTGCGCAG 
TTTTCGGCAC TGGCGATCAT CGAGCAGACC CCCGGCCTGA TGCAGGCAGA CCTGGCCAAA 
GCGCTGGCGA TAGAGCCGCC TCAGGTCGTG CCGCTGCTGA ACAAACTCGA AGAGCGCGCG 
CTGGCCGTAC GTGTGCGCTG CAAGCCGGAC AAGCGCTCAT ACGGCATCTT TCTCAGCAAG 
ACCGGTGAGA CGCTGCTGCG CGAACTGAAG CAGATTGCAG TCGACAGCGA CCTGGATTCC 
ACCTCGGCGC TGGATAACCA GGAACGCAAT GACCTGCTCA GGTTGCTGAA AAAGGTTTAC 
CAATCGTAA 

 

Protein sequence

MAKPSDSADI CQAPVQTAQA PLPKDSALDD LIGYAMRRAQ LKLFQNLIGR LSAHDLRPAQ 
FSALAIIEQT PGLMQADLAK ALAIEPPQVV PLLNKLEERA LAVRVRCKPD KRSYGIFLSK 
TGETLLRELK QIAVDSDLDS TSALDNQERN DLLRLLKKVY QS