Gene PSPTO_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2944 
Symbol 
ID1184598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3307573 
End bp3308403 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content59% 
IMG OID637394305 
Productp-hydroxycinnamoyl CoA hydratase/lyase 
Protein accessionNP_792742 
Protein GI28870123 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGT ACGAAGGTCG CTGGACAACC GTCAAGGTCG AGATCGAGCA AGGCATCGCG 
TGGGTCATCC TCAACCGACC GGAAAAACGC AACGCAATGA GCCCCACGCT CAATCGCGAA
ATGATCGATG TGCTGGAAAC ACTGGAACAG GACCCCGAGG CCGGTGTGCT GGTGCTGACC
GGTGCCGGTG AAGCCTGGAC CGCTGGCATG GACCTTAAGG AATACTTTCG CGAAGTGGAC
GCCGGCCCGG AAATTCTTCA GGAGAAGATT CGTCGCGAAG CATCCCAATG GCAATGGAAG
CTGCTGCGCA TGTACGCCAA ACCCACCATC GCCATGGTCA ATGGCTGGTG TTTCGGCGGT
GGCTTCAGCC CGCTGGTGGC GTGCGATCTG GCGATCTGTG CCGACGAGGC GACGTTCGGG
CTGTCGGAAA TCAACTGGGG CATTCCGCCT GGCAACCTGG TGAGCAAGGC GATGGCCGAC
ACCGTGGGCC ATCGCCAGTC GTTGTACTAC ATCATGACCG GCAAGACCTT CGACGGTAAA
AAAGCCGCCG AAATGGGGCT GGTCAATGAA AGTGTGCCGC TGGCACAACT GCGCCAGGTG
ACCATCGACC TGGCCCTCAA TCTGCTGGAA AAGAACCCGG TTGTCCTGCG TGCCGCCAAG
CATGGCTTCA AGCGTTGCCG CGAACTGACC TGGGAACAGA ACGAAGATTA CCTGTACGCC
AAACTCGACC AGTCGCGCCT GCTGGACAAG GAAGGCGGCC GCGAGCAGGG CATGAAGCAG
TTCCTCGACG ACAAGAGCAT CAAGCCAGGG CTGGAAGCGT ATAAGCGGTA G
 
Protein sequence
MSKYEGRWTT VKVEIEQGIA WVILNRPEKR NAMSPTLNRE MIDVLETLEQ DPEAGVLVLT 
GAGEAWTAGM DLKEYFREVD AGPEILQEKI RREASQWQWK LLRMYAKPTI AMVNGWCFGG
GFSPLVACDL AICADEATFG LSEINWGIPP GNLVSKAMAD TVGHRQSLYY IMTGKTFDGK
KAAEMGLVNE SVPLAQLRQV TIDLALNLLE KNPVVLRAAK HGFKRCRELT WEQNEDYLYA
KLDQSRLLDK EGGREQGMKQ FLDDKSIKPG LEAYKR