| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2940 |
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| Symbol | |
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| ID | 1184594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3302739 |
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| End bp | 3303980 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637394301 |
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| Product | thiolase family protein |
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| Protein accession | NP_792738 |
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| Protein GI | 28870119 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGGC AGTATTCGGC GTTCAGCGAC GTGGCCATTG TCGATGCGGT GCGTACGCCG
TGGGTCGACC TGGGCGGCGC GCTGGCGCAG ATTTCGCCCA TCGATCTGGG CATAAAGGTC
GGTCGTGAGG TGCTGGCCCG TGCGGCCATT GACCCGCAGC AGATTGACAG TGTGCTGGCC
GGCTCGATGG CGCAGGCCAG TTTCGACGCC TACCTGCTGC CCCGGCATAT CGGTCTGTAC
AGCGGCGTGG CGCAAAGCGT GCCGGCGTTG GGTGTGCAGC GGATTTGCGC CACAGGCTTC
GAACTGTTGC GTCAGGCCGC GCTGCAGGTG GGCGATGGCG GGCAGATGGC GCTGTGTGTC
GCGGCGGAGT CCATGTCACG CAATCCGATT GCCGCTTACA CCCATCGCGA CGGATTTCCG
CTGGGCGGCA CCGTGCAGTT CAAGGACTTT CTCTGGGAGG CCCTTTATGA CCCGGCACCC
GCAGTGGACA TGATCGCCAC GGCGGACAAC CTGGCGAAAC GTTACGGGTT GAGCCGCGAA
GCCGTGGATG GCTATGCGTT GCTTAGCCAT CAGCGCGCGC TGGAGTCGCA AGTCTTGGGC
AGGTGGTCTG CAGAAATCGT TGCCGTCGGC AACGAGCGCT TCGAGCTGGC AGGCTATCAG
CCGCGTGGCA TCGAGCTGCC GCGACGGGTC GAGACGGTCA CACAGGACAG CCACCCGCGC
ACGACCACTC TGGCTGCGTT GTCGCGGCTG CGCGCCATCC ATACCGATGG CGTGCAAACG
GCAGGCAACA GTTGTGCAGT GGTTGACGGT GCCGCGGCGG CACTGGTGGG GCGTGCTTCA
CAGTCAAAAA AGCCAGTATT GGCGCACCTG CTGGCCAGTG CAGTGATCGG CGTCGCTCCG
GAATTCATGG GCATTGGCCC GACGCCCGCC ATCCAGTTGT TATTGCAGCG CAGCGGGCTG
GCGCTGAGTG ACATTGGCCG GCTGGAAATC AACGAAGCGC AGGCCGCGCA GGTGCTCGCC
GTCGCGCAGA CACTGGAACT GGACTGCGAC CGGCTCAACT GCCAGGGCGG CTCGCTGGGC
ATCGGTCACC CGCTGGCTGC CACCGGGCTG CGTCTGGTCA TGACCCTGGC CCGGCAACTG
CGCGAAGAAA ACCTGCGTTA CGGGATTGCC GCCGCCTGCG TGGGCGGCGG GCAGGGCATG
GCGCTGTTGA TCGAGAATCC GGCTTTTATC GGCTCAAATT GA
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| Protein sequence | MSGQYSAFSD VAIVDAVRTP WVDLGGALAQ ISPIDLGIKV GREVLARAAI DPQQIDSVLA
GSMAQASFDA YLLPRHIGLY SGVAQSVPAL GVQRICATGF ELLRQAALQV GDGGQMALCV
AAESMSRNPI AAYTHRDGFP LGGTVQFKDF LWEALYDPAP AVDMIATADN LAKRYGLSRE
AVDGYALLSH QRALESQVLG RWSAEIVAVG NERFELAGYQ PRGIELPRRV ETVTQDSHPR
TTTLAALSRL RAIHTDGVQT AGNSCAVVDG AAAALVGRAS QSKKPVLAHL LASAVIGVAP
EFMGIGPTPA IQLLLQRSGL ALSDIGRLEI NEAQAAQVLA VAQTLELDCD RLNCQGGSLG
IGHPLAATGL RLVMTLARQL REENLRYGIA AACVGGGQGM ALLIENPAFI GSN
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