| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2926 |
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| Symbol | |
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| ID | 1184580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3288706 |
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| End bp | 3290265 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394287 |
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| Product | multidrug transporter, putative |
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| Protein accession | NP_792724 |
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| Protein GI | 28870105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0138273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACGC CGAGCCAGCC CGCGCTGACC TTCAGACAAG CCTTGTTGGC CATGCTCGGC
ATTTCGCTGG TGTTGATGCT TTCGGCGCTC GACCAGACGG TGATCGGTAA CGCCCTGCCC
AGCATTGTCT CGGAGCTCAA CGGCTTCGAG CTATATGCCT GGGTCGCCAC CGGCTACCTG
CTGGCCTCCA TCGTGACCAT TCCGATCTTT GGTCGGCTGG GCGATTTTTA CGGGCGAAAA
CCGTTCGTGC TGGCCGCCAC GGTGATTTTC ACCCTCGCCT CGCTGCTCTG CGCGCTGGCC
GACAGCATGT TGGCGCTGGT CATCGGCCGG GCGTTGCAGG GGGTCGGCGG CGGAATGCTG
ATCGGAACGG CGTTTGCCTG TGTGCCGGAA TTGTTTCCCG ACACTCGCCA GCGGCTGCGC
TGGCAGGTGT TGCTGAGTGC CATGTTCAGC GTGGTCAATG CCATCGGCCC GGGCCTGGGC
GGTTATCTGG CTGGCGAGTT CGGCTGGCGC TCGGTGTTCT GGCTGAACCT GCCGCTGGGC
GTGATCGCGC TGTTTTTCGC CTGGCGTTTT CTACCCTGGT ATCGCCCGCA AACCGCCGGT
GCGATCAGGC TCGACTGGAT CGGCGCGATG TTGATCGTCC TGAGCCTGGG CAGCCTGCAA
CTGTTCGTTG AATGGCTCGG CCAACGCGCT CTGGCGATCA GCCTGCTGTG CGGCGTGATC
ACCGTTGTCG CCATGACCGG CCTGTGGTTC TGGGAACGCC GCTGCACATT TGCCTTGCTG
CCCGCCGGGC TGTTTGCCAA TCGCAGTATC CGCCTGCTGT TCATCATGTC GCTGCTGGCT
GGCGCAATCA TGTTCACGCT GCTGTTCTAC CTGCCGCTGC TGTTGCAGGG CAGTTATGGC
TACTCGCCGC AGGACGCCGG GCTGCTGCTC ACCCCGCTGG CCCTGAGTAT CACTCTGGGC
GCCATCGTCA ACAGCCGCAT CGTCACGTGT CTGGCAAACC CCAACTGGCT GCCCATTGGC
GGGTTCATCG CCTTGTCGGT TGCCTGCATT GCCCTGGCGC TGGTCGGGCT GCAGGCTGGC
TTCGCAACCT TGCTGGGGCT GATTCTGCTG GCGGGTCTGG GCCTTGGGTT CATTTTGCTC
AACCTCACGG TGTTCACCCA GACCCTCGCC GAGCGGCAGT TTCTCGGTAT CGCCACTGCA
CTCACCCAAT CGTTGCGGCT GGTGGGCGGC TTGTTGGGCA CCGCGGCCAT GGGCGTGCTG
GTCAAGTTGC TGTACATCGC CAACCTGCAA CGTGCACTGA CCGCGGCTGG CCAGATAAAG
ACAATGCCGC ACCTGGCGGA TCCGCAGGTC CTGCTGCAGC ACTCGTCTGC AGATGTTGAC
GCCACGTTAC TGCTGGCTCG CACTGCCCTC GCCCAGGCCG TCGGCACCGG GCTGATGATC
TGCGCAGCGC TGGGCGTACT CGCACTGGTG GTTCTTTACC GTTTACCTCG CGTCACGCTG
TATCAAGCGC CTCACACTGC GATACCTGCA AAGGATTCAG CTGAAAAACA CGCTTCTTAA
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| Protein sequence | MTTPSQPALT FRQALLAMLG ISLVLMLSAL DQTVIGNALP SIVSELNGFE LYAWVATGYL
LASIVTIPIF GRLGDFYGRK PFVLAATVIF TLASLLCALA DSMLALVIGR ALQGVGGGML
IGTAFACVPE LFPDTRQRLR WQVLLSAMFS VVNAIGPGLG GYLAGEFGWR SVFWLNLPLG
VIALFFAWRF LPWYRPQTAG AIRLDWIGAM LIVLSLGSLQ LFVEWLGQRA LAISLLCGVI
TVVAMTGLWF WERRCTFALL PAGLFANRSI RLLFIMSLLA GAIMFTLLFY LPLLLQGSYG
YSPQDAGLLL TPLALSITLG AIVNSRIVTC LANPNWLPIG GFIALSVACI ALALVGLQAG
FATLLGLILL AGLGLGFILL NLTVFTQTLA ERQFLGIATA LTQSLRLVGG LLGTAAMGVL
VKLLYIANLQ RALTAAGQIK TMPHLADPQV LLQHSSADVD ATLLLARTAL AQAVGTGLMI
CAALGVLALV VLYRLPRVTL YQAPHTAIPA KDSAEKHAS
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