Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2923 |
Symbol | |
ID | 1184577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3286291 |
End bp | 3287199 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637394284 |
Product | nitrogen assimilation regulatory protein Nac, putative |
Protein accession | NP_792721 |
Protein GI | 28870102 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00510012 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACCTTC GCCGCTTGAA ATACTTTGTG AAAATAGTCG ATATCGGCAG CCTGACTCAG GCCGCCGATG TTCTGCACAT CGCGCAGCCT GCGTTGAGCC AGCAGTTGGT GACGCTGGAG GCCGAGTTGC AACAACAGTT ATTGATCCGC ACCAAGCGCG GCGTTACCCC GACCGAAGCG GGCAAAGTGC TGTACGGGCA TGCTCAGGTC ATCCTGCGTC AGTGCGAGCA GGCGCAGAGC GACGTCAACG CCAGTGGCCT CGCACTGTCG GGGCCGGTTT CGGTGGGGCT GGCGCCTGGC ACGGCTGCTT CGACGCTGTC GTTGCCATTG CTCAAACGGG TGCGCGAGCG TCATCCGGGC ATTTTGCTGT ACCTCAATGA AAATTTCGGA ACCACCCTCA GCGAACTGAT CATGAACGGG CGCATGGACA TGGCGGTGCT TTATGGCGGA CGTGAGGTGC ACGGCCTGAG TTTTGTACCC TTGATGCGCG AACAGTTGTA CCTGGTCAGC GCTGACGACG CCCGCCAGGG TCGCGAGGAA ATACCGCTGG CGGAGCTTGC CGACATCGAT TTGCTGTTGC CGCGCACCTA CAACACCATC CGCCGCCTGG TGGACGAGGC GTTCTTGCGC ATCGAGCGCA GCGCCCGGGT GGTGGCAGAA ATCGAGTCAT CGACGACCCT GGCCGCCGCC GTGGCCGATC GTTTCGGCTC GACGATCCTC CCCGAATCCG CTGCGCGGGT GCTCGCCGAC ACGCATGCGG TCAACCTCAG CCGGATCGTC GAACCCGAGA TCGAAGCGCC TCTGGCCCTG TGCCTCTCAG GCCACTTGCC GTTGTCGGTC CCGGCTCAGG CGGTCAAGGC GATCCTGCTG GAGCTGGTCG CAGAAATGCG CGGCAACCGC CGTACGTAA
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Protein sequence | MNLRRLKYFV KIVDIGSLTQ AADVLHIAQP ALSQQLVTLE AELQQQLLIR TKRGVTPTEA GKVLYGHAQV ILRQCEQAQS DVNASGLALS GPVSVGLAPG TAASTLSLPL LKRVRERHPG ILLYLNENFG TTLSELIMNG RMDMAVLYGG REVHGLSFVP LMREQLYLVS ADDARQGREE IPLAELADID LLLPRTYNTI RRLVDEAFLR IERSARVVAE IESSTTLAAA VADRFGSTIL PESAARVLAD THAVNLSRIV EPEIEAPLAL CLSGHLPLSV PAQAVKAILL ELVAEMRGNR RT
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