Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2921 |
Symbol | accC-1 |
ID | 1184575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3284341 |
End bp | 3285693 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637394282 |
Product | acetyl-CoA carboxylase, biotin carboxylase |
Protein accession | NP_792719 |
Protein GI | 28870100 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0404064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGATA AAGTATTGAT CGCCAATCGC GGTGAAATCG CCCTGCGCAT ATTGCGCGCC TGCAAAGGCC TTGGCCTGCA GACCGTTGCG GTTTATTCCG AAGCGGATCG GGACGCCAGC TATGTGCAAC AGGCCGACGA AGCGCTGTGC ATCGGGCCTG CTGCGCCGGG GCAGAGTTAC CTGAATCAGG CCGCTGTGCT TTACGCGGCC CAACTGACCG GCGCTCAGGC GATCCACCCA GGCTACGGGT TTCTCTCCGA GAACGCCGCC TTCGCCGAAC GTATCGAGCA GGCTGGCCTG ACCTTCATCG GCCCCAGCGC CGCCTGTATT CGCGTGATGG GCGACAAGGT TGCGGCCAAA CGCGCAATGC GTGAAGCCGG TGTGCCTTGC GTGCCCGGCC CGGACACCAG CATGCCTGCC GATCCGCACA GCATTCTGGC GATTGCCCGC GACATCGGCT ACCCGGTCAT CGTCAAGGCT GCTGGCGGCG GCGGTGGGCG GGGTATGCGC GTGGTTCACG AAGAACAGCA GTTGCTCGAT GCCATTGCGC TGACCGGTGA AGAAGCGCGT CGGGCATTCG GCAATCCCGA GCTGTATATC GAGAAGTTTC TCGTCCAGCC GCGCCACGTC GAAATTCAGG TGCTGTGTGA TGCCTATGGC AATGCCGTCT GGCTCGGTTC GCGGGATTGC TCAATGCAGC GCCGCCACCA GAAGGTGCTT GAAGAGGCCC CGGCACCTGG GGTTGATGCG GCGCTGATGA CCCGGGTTGG CGAGCGCTGC GCACAAGCCT GTCGCCAGAT CGGCTATCAG GGCGTGGGCA CGTTTGAATT CCTGTTTGAA AACGACGAGT TCTATTTCAT CGAGATGAAC ACCCGCCTGC AGGTCGAGCA TCCGGTCACG GAAATGACCT CTGGCATCGA CATCGTCCAG CAGCAGATTC GCATGGCGAT GGGCGAGCGC CTGAGTTTCA GTCAGGCCGA CGTCAGCGTC TCGGGCCATT CGCTGGAATG CCGGATCAAC GCCGAAGACC CGCGCAGCTT CATGCCGACG CCGGGGCAGG TCACTCGCTG GCAGGTCCCC GGTGGCTTTG GCGTGCGCGT CGATTCGCAT GTCAGCCACG GTTACCGGGT CCCGCCTTAT TACGATTCGA TGGTGGCCAA AGTCATCACC CACGGTGCCA GCCGCGACGA GGCACTGGCG CGCATGCGTC TGGCGCTGAG CGAAATGCAC GTCGAAGGGA TTTCCACCAA CATCGCGCTG CACCGCGACA TTCTGCAGGA CCCGGTGTTC TGCAAGGGCG GTATGGACAT TCACCATCTG GAGCGTTGGT TGCAGACAAG GAGCCAGCCA TGA
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Protein sequence | MFDKVLIANR GEIALRILRA CKGLGLQTVA VYSEADRDAS YVQQADEALC IGPAAPGQSY LNQAAVLYAA QLTGAQAIHP GYGFLSENAA FAERIEQAGL TFIGPSAACI RVMGDKVAAK RAMREAGVPC VPGPDTSMPA DPHSILAIAR DIGYPVIVKA AGGGGGRGMR VVHEEQQLLD AIALTGEEAR RAFGNPELYI EKFLVQPRHV EIQVLCDAYG NAVWLGSRDC SMQRRHQKVL EEAPAPGVDA ALMTRVGERC AQACRQIGYQ GVGTFEFLFE NDEFYFIEMN TRLQVEHPVT EMTSGIDIVQ QQIRMAMGER LSFSQADVSV SGHSLECRIN AEDPRSFMPT PGQVTRWQVP GGFGVRVDSH VSHGYRVPPY YDSMVAKVIT HGASRDEALA RMRLALSEMH VEGISTNIAL HRDILQDPVF CKGGMDIHHL ERWLQTRSQP
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