| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2896 |
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| Symbol | |
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| ID | 1184550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3258416 |
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| End bp | 3260020 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637394257 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | NP_792694 |
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| Protein GI | 28870075 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.287234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGGAAA ACAAGACCCG TGTCGACAAC GCGGCGACGG GAGATATCCA GCATCAGGGC
AAGGATATCT TTTTCGCGGC GGTAGAAACG ACACGGATGC CCATGATCGT CACCGACCCC
AATCGTCCGG ACAATCCGAT CATTTTTTCC AACCGGGCTT TTCTGGAAAT GACGGGGTAT
ACGGCCGAAG AAATCCTTGG CACCAATTGC CGGTTTCTTC AGGGGCCGGA CACTGATCCC
GCTGTTGTGC AGTCCATTCG CGACGCTATT GCGCAACGTA ACGATATTTC CGCCGAAATC
ATCAACTACC GCAAGGATGG CTCTTCGTTC TGGAATGCGT TGTTTATTTC TCCGGTCTAT
AACGACGCGG GTGATTTGAT CTATTTTTTC GCTTCTCAGC TGGACATCAG TCGCCGCAAA
GACGCTGAAG AAGCATTGCG TCAGGCGCAG AAGATGGAAG CGCTGGGGCA GCTCACCGGT
GGCATTGCTC ACGATTTCAA CAACCTGTTG CAGGTGATGG GTGGTTACAT TGATCTGATC
GGCAGTGCCG CCGAAAAACC GGTCATTGAC GTGCAGCGCG TCCAGCGCAG CGTTTACCAT
GCCAAGTCTG CCGTCGAGCG CGCCAGCACG TTGACCAAGC AACTGCTGGC GTTTGCCCGC
AAGCAAAAAC TTCAGGGGCG CGTGCTCAAC CTCAACGGTC TGGTTTCCAT CGTTGAGCCT
TTAATCGAGC GTACGTTTGG GCCGGAAGTG GCCATTGAAA CCGACCTGGA ACCGGCACTG
AAGAACTGCC GTATCGACCC GACTCAGGCA GAAGTTGCCC TACTGAACAT CTTTATCAAT
GCCAGGGATG CGTTGATTGG CAGAGAAAAC CCCAAGGTAT TCATCGAGAC ACGCAACCTG
CTCGTTGATG AACTGGCCAA CATGTCTTAC GACGGCTTGT TACCCGGCCG CTACGTGAGC
ATCGCTGTGA CCGACAATGG CATCGGCATG CCGGCGAGTA TTCGCGACCG GGTGATGGAC
CCGTTTTTTA CTACCAAGGA GGAGGGCAAG GGTTCCGGGC TTGGCCTGTC GATGGTCTAC
GGTTTTGCCA AGCAGTCGGG CGGCGCGGCG CGTATCTATA CCGAAGAAGG CGTAGGCACC
ACATTGCGCC TGTATTTTCC TGTGGATGAA GCGGGGCTGA CCAATACAGA GTCACCTCAG
GCATCGGATA GACGCCTGGG CAGCAGCGAG CGGATTCTGA TCGTCGAAGA CCGGCCGGAT
GTGGCGGAGC TTGCAAAAAT GGTCCTTGAT GACTACGGCT ATGTCTCGGA GATCGTGTTG
AATGCTCGCG AAGCCCTGAA GAAGTTCGAA TCCGGCAATA TGTATGACTT GCTGTTCACC
GATCTGATCA TGCCGGGCGG CATGAACGGT GTGATGCTCG CGCGCGAAGT CAGGCGCAGG
TATCCCAAGG TCAAGGTGCT GTTGACCACC GGCTATGCGG AAAGCTCGAT CGAGCGGACG
GATATCGGCG GTTCAGAGTT TGATGTGGTA TCCAAGCCCT GCATGCCCCA TGACCTGGCC
AGAAAAGTTC GCCAGGTGCT GGATGGTCCC AACGGCATTG CCTGA
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| Protein sequence | MSENKTRVDN AATGDIQHQG KDIFFAAVET TRMPMIVTDP NRPDNPIIFS NRAFLEMTGY
TAEEILGTNC RFLQGPDTDP AVVQSIRDAI AQRNDISAEI INYRKDGSSF WNALFISPVY
NDAGDLIYFF ASQLDISRRK DAEEALRQAQ KMEALGQLTG GIAHDFNNLL QVMGGYIDLI
GSAAEKPVID VQRVQRSVYH AKSAVERAST LTKQLLAFAR KQKLQGRVLN LNGLVSIVEP
LIERTFGPEV AIETDLEPAL KNCRIDPTQA EVALLNIFIN ARDALIGREN PKVFIETRNL
LVDELANMSY DGLLPGRYVS IAVTDNGIGM PASIRDRVMD PFFTTKEEGK GSGLGLSMVY
GFAKQSGGAA RIYTEEGVGT TLRLYFPVDE AGLTNTESPQ ASDRRLGSSE RILIVEDRPD
VAELAKMVLD DYGYVSEIVL NAREALKKFE SGNMYDLLFT DLIMPGGMNG VMLAREVRRR
YPKVKVLLTT GYAESSIERT DIGGSEFDVV SKPCMPHDLA RKVRQVLDGP NGIA
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