Gene PSPTO_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2895 
Symbol 
ID1184549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3257076 
End bp3258095 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content57% 
IMG OID637394256 
Producthypothetical protein 
Protein accessionNP_792693 
Protein GI28870074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0232978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGAG ACGACCGTAT CGCCCCCGGT GCTCCCGTGT ATCACGAAAC TCATGCGACG 
GCACCGCTGC TTAAACGAAT CTCCTGGAGT GCGATTCTGG CCGGTGTTGT ACTGGCCATG
GTTGTTTCGC TTTTGCTTAA CCTTTTAGGC ACTGCCATTG GCAGCGCCAG CATTGATCCG
ATGCAAGAAG CCAATCCGTT GTCCGGTATT GGTACAGGCG CTGGTATCTG GGTGGTTGTC
AGCTCGGTCA TTTCGCTGTT CGTTGGCGGT TGGGCTGCAG GTCGTCTGGC TCAACGTGAA
GGTGCATTCC ATGGCCTGCT GGTCTGGGCG ACGGTATCGC TTATCACTGT GTACCTGGTC
TCCAGCGCAG TCACCGGTGT AGTGCGCGGC GGTCTTAATC TGGCAGGCAG CGGCATGTCG
GCGCTGGGTA GCGGCATCGC TCAGGTTGCT CCGGCAGTGG GCAGCAAGAT CCAGGACCAA
CTGCGTGCAC AGGGCATCGA CTTCAACCTG GACGATATTC AGGGTGAAAT CGAAACCGCC
ATGCGTCAGA CCGGTAAAGC CGAGTTGAAC CCGGACAACG TCAAGCAGGA AGCCCAGGCT
ACCCAGCAGG ACGCACAAAA CACGGCTAAA CAAAGCGCAC AGAACCCTCA GCAAGCCGAC
GAGCAGTTGG GCGGCCTGAT GGATCGCATC AAAGCCAAAG GCGACCAGGC TTGGGACGCT
GCTGACCGTC AGGCGCTGGT TAACCTGATC AAGGCACGCG GCAACAAGAC TGATGCTGAA
GCCAATCAGA TCGTTGATCA GGCTCAAGCC AGCTATCGTC AGGCTTATGC CAAGTATCAG
GAACTGAAAG CTCAGGCTGA ACAAAAAGCA CGAGAAGCGG CTGAAGTCAC TGCCAAGCGT
GTTTCGCAAG GTGCGTGGAT TCTGCTGATT ACCCTGGTGA TTTCGGGTCT GGTAGCGGCC
GGTGCAGGTG TACTGGGTCG TCGTACTCAG CCGCCAGCCA AGGTTGTTGC TGCGATCTGA
 
Protein sequence
MIRDDRIAPG APVYHETHAT APLLKRISWS AILAGVVLAM VVSLLLNLLG TAIGSASIDP 
MQEANPLSGI GTGAGIWVVV SSVISLFVGG WAAGRLAQRE GAFHGLLVWA TVSLITVYLV
SSAVTGVVRG GLNLAGSGMS ALGSGIAQVA PAVGSKIQDQ LRAQGIDFNL DDIQGEIETA
MRQTGKAELN PDNVKQEAQA TQQDAQNTAK QSAQNPQQAD EQLGGLMDRI KAKGDQAWDA
ADRQALVNLI KARGNKTDAE ANQIVDQAQA SYRQAYAKYQ ELKAQAEQKA REAAEVTAKR
VSQGAWILLI TLVISGLVAA GAGVLGRRTQ PPAKVVAAI