Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2895 |
Symbol | |
ID | 1184549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3257076 |
End bp | 3258095 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637394256 |
Product | hypothetical protein |
Protein accession | NP_792693 |
Protein GI | 28870074 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0232978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGAG ACGACCGTAT CGCCCCCGGT GCTCCCGTGT ATCACGAAAC TCATGCGACG GCACCGCTGC TTAAACGAAT CTCCTGGAGT GCGATTCTGG CCGGTGTTGT ACTGGCCATG GTTGTTTCGC TTTTGCTTAA CCTTTTAGGC ACTGCCATTG GCAGCGCCAG CATTGATCCG ATGCAAGAAG CCAATCCGTT GTCCGGTATT GGTACAGGCG CTGGTATCTG GGTGGTTGTC AGCTCGGTCA TTTCGCTGTT CGTTGGCGGT TGGGCTGCAG GTCGTCTGGC TCAACGTGAA GGTGCATTCC ATGGCCTGCT GGTCTGGGCG ACGGTATCGC TTATCACTGT GTACCTGGTC TCCAGCGCAG TCACCGGTGT AGTGCGCGGC GGTCTTAATC TGGCAGGCAG CGGCATGTCG GCGCTGGGTA GCGGCATCGC TCAGGTTGCT CCGGCAGTGG GCAGCAAGAT CCAGGACCAA CTGCGTGCAC AGGGCATCGA CTTCAACCTG GACGATATTC AGGGTGAAAT CGAAACCGCC ATGCGTCAGA CCGGTAAAGC CGAGTTGAAC CCGGACAACG TCAAGCAGGA AGCCCAGGCT ACCCAGCAGG ACGCACAAAA CACGGCTAAA CAAAGCGCAC AGAACCCTCA GCAAGCCGAC GAGCAGTTGG GCGGCCTGAT GGATCGCATC AAAGCCAAAG GCGACCAGGC TTGGGACGCT GCTGACCGTC AGGCGCTGGT TAACCTGATC AAGGCACGCG GCAACAAGAC TGATGCTGAA GCCAATCAGA TCGTTGATCA GGCTCAAGCC AGCTATCGTC AGGCTTATGC CAAGTATCAG GAACTGAAAG CTCAGGCTGA ACAAAAAGCA CGAGAAGCGG CTGAAGTCAC TGCCAAGCGT GTTTCGCAAG GTGCGTGGAT TCTGCTGATT ACCCTGGTGA TTTCGGGTCT GGTAGCGGCC GGTGCAGGTG TACTGGGTCG TCGTACTCAG CCGCCAGCCA AGGTTGTTGC TGCGATCTGA
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Protein sequence | MIRDDRIAPG APVYHETHAT APLLKRISWS AILAGVVLAM VVSLLLNLLG TAIGSASIDP MQEANPLSGI GTGAGIWVVV SSVISLFVGG WAAGRLAQRE GAFHGLLVWA TVSLITVYLV SSAVTGVVRG GLNLAGSGMS ALGSGIAQVA PAVGSKIQDQ LRAQGIDFNL DDIQGEIETA MRQTGKAELN PDNVKQEAQA TQQDAQNTAK QSAQNPQQAD EQLGGLMDRI KAKGDQAWDA ADRQALVNLI KARGNKTDAE ANQIVDQAQA SYRQAYAKYQ ELKAQAEQKA REAAEVTAKR VSQGAWILLI TLVISGLVAA GAGVLGRRTQ PPAKVVAAI
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