| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2894 |
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| Symbol | |
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| ID | 1184548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3254445 |
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| End bp | 3256850 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637394255 |
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| Product | lectin repeat domain protein |
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| Protein accession | NP_792692 |
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| Protein GI | 28870073 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.106224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA TGCCGGCTTT CACGTACGTG TTTTTCCTCG GTTTCTTTCA TTCAAACGCC
TTCTCTGCAG AGATGAACCC CTATGAGAAG ATCATCAGTA CCGTGCAAGG TGAGCAGGTC
TGTTTAACGC TGGACAGTGA GTCAAATGCT GTGTCACTGC TGAAATGCGT TAACACTGAT
CATCAACAAT GGATCTTTGT GTCAAAAGGA TCCATGTCGT ATATAAAAAA CAAGGCGCTA
GGAGGATCGG CACAACCAAT GTGTTTGTCG GCGTCGAACC CAAGTAGCGT CAGCATGAAA
ACCTGCGCCA GCGCCAACAG CAACGACTAT GAAACCTTGC GACTCTGGAG CAGGGACGGT
GACAATCCCA GCTTGTTATC AAATCAATAC ATCAAGGATT TAGGGTTTGA TAACTACCTG
CTCAGCAACG GAAGCGAGCA GTTGGTGTTT GGCAAGGCAG AGACGGCTTT GTCGAAATGG
ACAATCACTC AACCTCTTTA CGAAGAGATC ATCAGCATAG TGAATGGCCT CGACACCTGT
TTAACGGTGA CGGGTGACAT GACCAGCGTG GTACTGCAAA AGTGCCTGGG CAGGGACAGC
CAGCAATGGA CGTTTACGCC AGAGGGGACA AGGCTGTATG TAAAAAACAA ATTGCTGGCC
ACCTCAATGC CAGAAATGTG TTTGTTTGCT GCGAACTCAA ACAGTGTGAA AATGGCAACG
TGTAAAAGCG TTAACGACAG CGACTATCAG ACTAAACGAC AATGGAACAG GGACGGTAAC
GCACCCAGCT TGCTGTCGAA CAAATATATC AGTGATCTGG GAAAGGCTAA CTACCTGCAA
ATCAATGCCA GCGAGCAGTT GATATTTGGC AGCAAAGAGC AACGCTCGGC GAGCTGGGGT
ATCGCCAAGC GCTATGGGTA CATCAGGAAC GTTGAAAAAG GGCAGGAAAA ATGCCTCACT
TTGTCTGCTG ATGAAGTCAA TGTCGAGTTT TCTCCCTGCA AGAGTGTGGC CGGACAAGAT
TGGCGAATGT CCATGATTTT CGAGGGATTA GAGGGATATA AAAAATTGAC CAATCGCGCG
CTGCTTGATA GGGATACAGA TAAGTGCTTA GGGTCAGACA GTAAAATAAT AAATTGTAAA
GGCTCTGGGT ACACTTCGCA ACGCTCCTGG AGCTACAGCA GAAACTCTGT TCCGCCCGCA
GAAGGTTTTA CCCTGGCCAA TAAGTATCGC AACGACCTTG GCGTTGATGA TAAGGTTCTG
GGCTTTTCAG GCAATACTGT TCAGATGGTG CCGGAATCAC GGTCGAATGC GGTGACGTGG
AACTTTGAAC TGGCGATACC TAAAATCCCC ATACGCCCCG TCGTAGGCGA CAGAAAAGTT
CTCCTGCTGC ATACCCAATA CAGTGACAGA CCCGAAACCG ACTTCGTCGA GGTTCAGAGA
GGTTTTTTTG GAAGTCCAAA TGATAACTAT TCATTCATCA ACGCGGTTCA CCGCGCCTCT
GATAACAACC TGCATTTTAC AGGCGATGCA GTGACCGGTC TTGACCTGGG TCCAAGACCT
TCGGATTGCC CGTCAACTGA ACTGAGGAAC AAAGCGATAG ACCTCGCACG GGCTAAAGGA
TTCGACAGTA ATAACTACGA TTATGTCGCC TTCGAGATTC CCTCTACTTC GTGCTCCTGG
GTTGGCCTTG CTGCGGTACC GGGCTGGTGG GCCATGGGAA ATAATGCGGG ACACAAGCCG
TGGATGTGGC AACACGAATT TGGCCATAGT CTCGGCGGCC CGCACGCAAA ATCGCTGGAA
CGCTGCCCGT ATGACAATCG AGAAGTGGTG CAAATCGGTG GCAGTGGGTG CGCAGTCACC
GCCGCGGGCG ATCCATCGGA TACCCTTAAT GGCGGAGGCT CACGCCTTTA CCCCATTCCT
TATCTGTACT ACGCAGGCTG GCTCACTGAT GAGCAATTCC CTGAAGTGAT AAAAAATGGC
ACCTATGAAA TTGCACCCTT GTTTAGAAAA GCCAATGCCA CAGTTGTCAG AGGTTTACGC
CTGTTTCGTA GCGATGGCAG TTACCTTACG CTGGAATTGC GCAAGCCTTC ACCGGGCTTT
GAAAACTGGC CAACTGATGA TCCATTCGTC AATGGCGTGA TTGTGAGAAT CGCACGATTT
AGCGTTAACT CCGTTTCCAA CACGCTCGTG GACACAACGC CAACAGGCAT ACATGGCATG
AAAGACGCCC CCTTGCAGCC AGGTGCGTCG GCAGATGACG TGTTATCAGG GAAGCGAATC
ACCGTTAGCC ATATCGATGA CTCAGGGGCT ACCGTCGAGA TCAGCGATAT TCCAAGTAGC
TTGCTTTTTG AACGCTCCCC TGTTGAGCGG CCGGTACAGC AGGACGAGCA GGTGGTGGAA
GATTAA
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| Protein sequence | MKTMPAFTYV FFLGFFHSNA FSAEMNPYEK IISTVQGEQV CLTLDSESNA VSLLKCVNTD
HQQWIFVSKG SMSYIKNKAL GGSAQPMCLS ASNPSSVSMK TCASANSNDY ETLRLWSRDG
DNPSLLSNQY IKDLGFDNYL LSNGSEQLVF GKAETALSKW TITQPLYEEI ISIVNGLDTC
LTVTGDMTSV VLQKCLGRDS QQWTFTPEGT RLYVKNKLLA TSMPEMCLFA ANSNSVKMAT
CKSVNDSDYQ TKRQWNRDGN APSLLSNKYI SDLGKANYLQ INASEQLIFG SKEQRSASWG
IAKRYGYIRN VEKGQEKCLT LSADEVNVEF SPCKSVAGQD WRMSMIFEGL EGYKKLTNRA
LLDRDTDKCL GSDSKIINCK GSGYTSQRSW SYSRNSVPPA EGFTLANKYR NDLGVDDKVL
GFSGNTVQMV PESRSNAVTW NFELAIPKIP IRPVVGDRKV LLLHTQYSDR PETDFVEVQR
GFFGSPNDNY SFINAVHRAS DNNLHFTGDA VTGLDLGPRP SDCPSTELRN KAIDLARAKG
FDSNNYDYVA FEIPSTSCSW VGLAAVPGWW AMGNNAGHKP WMWQHEFGHS LGGPHAKSLE
RCPYDNREVV QIGGSGCAVT AAGDPSDTLN GGGSRLYPIP YLYYAGWLTD EQFPEVIKNG
TYEIAPLFRK ANATVVRGLR LFRSDGSYLT LELRKPSPGF ENWPTDDPFV NGVIVRIARF
SVNSVSNTLV DTTPTGIHGM KDAPLQPGAS ADDVLSGKRI TVSHIDDSGA TVEISDIPSS
LLFERSPVER PVQQDEQVVE D
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