Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2883 |
Symbol | |
ID | 1184537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3246195 |
End bp | 3247556 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394246 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_792683 |
Protein GI | 28870064 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.536147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATG AAGAGTGCAA GCCCAAACTG TCCCGGATAG CCGCAATGTT CAACTCTCAT TTGAAAAAAA CCAACCAGGC ATTGGAGCGC CGTCTCGCCA TGCTCGAGCA AGCAGGGCAC ATTCTGAATC TGGAGACCGT TGCCGTCGTT CTGGACAGGC AGGGCAAGGT GCAGACCGTC AACGGCCTGT TCGAGACGGA GCTGAGCTAC TCACAAAGCG AGATTGCCGG GCGTAGCCTT TCTGAAATGA GCCCGCCCGA GTTGAGCGGC GACACTCACC AGAAGCGCGC TTTGGCTGCG ATTCGGGACG GCAAGCATTT CAGCGGCACG TTGCGGCTGG TCAGCAAGAC AGGTGCAAGG GTCTGGTTGA GGACTGTGGT GGTGCCGTTC AAGAATGAGA CTGGCGGCAT CGAGCAGATC ACGTTGTACT CAAGCGTTTT GACCCGAACT ATTGAGGCCT CGCGTGAGAA TGAGGCGCTG GTCAATGCGT TACAGCGGTC CACCGCCGTC ATCGAATTCA CCCTTGACGG AATGGTCATT ACCGCCAATG ACAACTTCCT GAAAGCGATG GGTTATGAGC TGAATCAGAT AAAGGGCAAG CATCACAAGA TGTTCTGCGT GCCTGAAGAA TCCAACGCTG ACGCGTATAG CCACTTCTGG GAAAGATTGC GTCGAGGCGA GTTTATCGTC GATCGTTTTC GCCGGGTCGA CAAGGCTGGC CGCGACGTGT GGCTGGAGGC GTCCTATAAC CCTATTACCG ACGCAAACGG CAAGCTCTAT AAAATTGCAA AGTTCGCGAC GGTTATTACT GAGCAGGTTG AGCGTGAAAA GGCCGTTGCC GAAGCGTCGG ACATGGCCTA TCAAACGTCT ATCGATACCG ATGCCAGTGC ACAGCAAGGA CGAAAGGTCA TCAAGGACAC GCTGCAGATG CTGGGTCAGT TGACGATTTC CATGGAAGAC GCCACGCGAG GCATCGAGGC ACTGGACTCT CAGAGCCAGG TGATTGGCAC GATCATAAAA ACCATCAGCG GGATCGCCGA GCAAACCAAT CTGCTCGCGT TGAACGCCGC CATCGAAGCT GCCCGGGCCG GTGAACAGGG CAGGGGGTTC GCGGTAGTGG CCGACGAGGT CCGCCAGTTG GCGTCGCGCA CGACAAAAGC GGCAGAAGAA GTGGTCAACG TCGTCAAGAA GAACCAGAGC CTGGCGTCCG AGGCAGTCAA TGTAATCGTG CGCAGTACCG AACAGGCTTC CGGCGCACTG GAGCTGGCTA ACGATGCAGA TCGTGTCATC CAGGAAATCC AGCAAGGCGC GAACACGGTA GTGCGCGCCG TCAGCCGTTT TGTTAATCAG CGTTCGAGTT AG
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Protein sequence | MTDEECKPKL SRIAAMFNSH LKKTNQALER RLAMLEQAGH ILNLETVAVV LDRQGKVQTV NGLFETELSY SQSEIAGRSL SEMSPPELSG DTHQKRALAA IRDGKHFSGT LRLVSKTGAR VWLRTVVVPF KNETGGIEQI TLYSSVLTRT IEASRENEAL VNALQRSTAV IEFTLDGMVI TANDNFLKAM GYELNQIKGK HHKMFCVPEE SNADAYSHFW ERLRRGEFIV DRFRRVDKAG RDVWLEASYN PITDANGKLY KIAKFATVIT EQVEREKAVA EASDMAYQTS IDTDASAQQG RKVIKDTLQM LGQLTISMED ATRGIEALDS QSQVIGTIIK TISGIAEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRQL ASRTTKAAEE VVNVVKKNQS LASEAVNVIV RSTEQASGAL ELANDADRVI QEIQQGANTV VRAVSRFVNQ RSS
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