| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2876 |
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| Symbol | |
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| ID | 1184530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3238825 |
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| End bp | 3240048 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637394240 |
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| Product | ABC transporter, permease protein, putative |
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| Protein accession | NP_792677 |
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| Protein GI | 28870058 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0331107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACCGGC CTTTTAAGCG TCTTGGCCTG CTGGCACGCC TGGCCATTGC AGACCTGTGG
CACGACCGTA AAGTGTCGCT GTGCATTGCC GCTTCGCTGG TCGCCGTGAT CGCGCCGTTG
CTGCTGCTGT TCGGCCTCAA ACATGGCGTG GTCGGCCAAC TGCAGGCAGA ACTGCTGCGC
GACCCACGCA ACCTTGAAAT CAAGTTGCTC AGCAGTGGCA ACTACGACGA GCAGTGGCTG
AACAGGCTGC AACAGCGGCC CGAAACCGGC TTTGCCCTTG GCATGACCCG CTCGCTCAAC
ACCCAGGCCG ACCTGATCGG CAGTCGCGGT CGCTTTGTCG ACAACGCCGA AATCCTGCCC
ACCGGGCCGG GTGACCCTTT ACTGGCTGCA CAGGCCATGG CCATCCTGCC GGGCCAGGTG
ATTCTCAGCA ACGCCGCTGC CGAGCGTTTG GCGCTGGTCC CCGGCGATAC GCTGCGTCTG
GCCGTGCAGC GTCGTCTGGA CGGCGCGCCC GAACGAGGCG AAACCACGCT GACGCTGGTC
GCTGTGTTGC CGGCAGCCCG CTTTTCCAGG CCCGCCGCAT TTGCCCATCC CGATCTGTTG
CTGCAACTGG AGCATTTTCG AGACGGTTTT GCGATTTCTG CCCTCGGTGC CACCCGCGGT
CAGGCAGAAG ACCAGCTTGC GCCCCGCTAC GCCCGCGCTC GTCTGTACGC CCGTGACATC
GACAGCGTCG CGCCACTGGA GCGCTGGTTG AACGAGCAAC ATATCGAAAC AGGCAGCCGG
CTGGCCGATA TCGACAATGT CAAAGCCATC AATCACGTGC TGAGCGTGAT CTTCGGCGTG
ATCGCCGGGG CCGCTTTGCT GGGCTGCATC GCTTCGCTGA TAGGCGCCTT CCTCGCGAAC
ATCGATCGCA AACGCCGCAG CCTCGCCTTG TTGCGGCTCA TGGGCTTCAC CGCGCCCGCA
GTGGCGGGCT ATCTGGTCCT GCAGGCATTG CTGCTGGCCG TAGTCGGCTA TGTCGGCGGC
CTGGGGTTCT ACTTTGCCGG CAGCGAGGCG TTCAATCACC TGCTGGGCGG CCAGCGCATC
ACCGGCGGTT TCATTTGCCA GATCACCCCG TTGCACGGCC TTGCCGCACT GGCGCTTGCG
CTGGTGGTAT CAGCGCTGGT TGCGCTGGCA GGTGCCACCC GAGCCATCCG AATTCAACCT
GCGGAGAGTC TGCGTGAACT CTAG
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| Protein sequence | MNRPFKRLGL LARLAIADLW HDRKVSLCIA ASLVAVIAPL LLLFGLKHGV VGQLQAELLR
DPRNLEIKLL SSGNYDEQWL NRLQQRPETG FALGMTRSLN TQADLIGSRG RFVDNAEILP
TGPGDPLLAA QAMAILPGQV ILSNAAAERL ALVPGDTLRL AVQRRLDGAP ERGETTLTLV
AVLPAARFSR PAAFAHPDLL LQLEHFRDGF AISALGATRG QAEDQLAPRY ARARLYARDI
DSVAPLERWL NEQHIETGSR LADIDNVKAI NHVLSVIFGV IAGAALLGCI ASLIGAFLAN
IDRKRRSLAL LRLMGFTAPA VAGYLVLQAL LLAVVGYVGG LGFYFAGSEA FNHLLGGQRI
TGGFICQITP LHGLAALALA LVVSALVALA GATRAIRIQP AESLREL
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