| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2875 |
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| Symbol | |
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| ID | 1184529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3238149 |
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| End bp | 3238841 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394239 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | NP_792676 |
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| Protein GI | 28870057 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0026509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCAAA TCAAAGGACT GAACGTGCAG CGAGGGAGCG GCACACAGGC ACACCGGGTG
CACCTGCCCG AGCTGAACCT GGCGCGTGGG CAGGTGGTGG CGATTACCGG CGAAAGCGGC
TGCGGCAAAA GCACCCTGCT TGAAGCCCTT GGTTTGCTGC TGGCCCCTCA GAGCATCGCG
CAATACAACC TTGATGGCGT GGACATCGCT GCCCTGCTGG CAGCCGATGA TCAACCGGCA
CTGGCGGATG TGCGGGCGCG CGCGCTGGGT TTCGTCCTGC AAAGTGGCGG GCTGCTGCCG
TTTCTGAACA TCCGCGACAA CATCAATCTG CCCCGCCGGT TATCGGGGCT GGACAGCAAA
AGCGATCATG TCGACCGGGC CATTACTGCG CTGCGTCTTG AGCCTTTGCT GGACCAGTTG
CCGCAGGCGC TGTCGATCGG CGAACGTCAA CGCGTCGCCT GCGTGCGCGC CATTGCCCAT
CTGCCTCGCC TTATTCTGGC CGACGAGCCT ACCGCAGCGC TGGACCCGCA TAACGCCCGG
CAGTTGTTTG AACTGCTGTT GAGCCTGGTC GACGAACTAG GCCTGAGTGC GCTGATTGTC
TCGCACGACT GGCAACTGGT GGATAGCTTT GGCCTGCCCC GCTTGAACGC CGTCAGTGTG
GCTGGGGAGA CGCGTTTTGA ACCGGCCTTT TAA
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| Protein sequence | MLQIKGLNVQ RGSGTQAHRV HLPELNLARG QVVAITGESG CGKSTLLEAL GLLLAPQSIA
QYNLDGVDIA ALLAADDQPA LADVRARALG FVLQSGGLLP FLNIRDNINL PRRLSGLDSK
SDHVDRAITA LRLEPLLDQL PQALSIGERQ RVACVRAIAH LPRLILADEP TAALDPHNAR
QLFELLLSLV DELGLSALIV SHDWQLVDSF GLPRLNAVSV AGETRFEPAF
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