Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2867 |
Symbol | |
ID | 1184521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3225935 |
End bp | 3226375 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394231 |
Product | TspO/MBR family protein |
Protein accession | NP_792668 |
Protein GI | 28870049 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0727696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTCT TCATCTTCCT TCTAGCCTGC TCCGCCGCCG CCGCAACCGG CATCATCTTC AAACCGGGCG CATGGTACGA ATCCCTTCAA AAACCTGCCT TCACCCCACC AAACTGGGCA TTTCCGGTGG CGTGGACCAC GATCTATCTG CTCTTGGCCT GGGCAGGATA TCGTCTCACC CTCCTCCCCG GCAGCCAGAC CGTGCTGGCG CTATGGGCCG CTCAAATTGC ACTGAACACC TTATGGACCC CGGTATTCTT TGGCGCAAAC CGCATCGCCG CCGCGATGGT GATTCTTGCC CTGCTGTGGA TCGTTGTCGC CACAATGATC GTGATGGCAT TGCAGCTGGA CATCATTACA GGTCTGATTT TGTTTCCCTA TCTGGTGTGG CTCTCGGTGG CTGCGGCGCT GAACTTTTCT ATTCTGCGCC ACAACCGATA A
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Protein sequence | MTFFIFLLAC SAAAATGIIF KPGAWYESLQ KPAFTPPNWA FPVAWTTIYL LLAWAGYRLT LLPGSQTVLA LWAAQIALNT LWTPVFFGAN RIAAAMVILA LLWIVVATMI VMALQLDIIT GLILFPYLVW LSVAAALNFS ILRHNR
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