| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2860 |
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| Symbol | |
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| ID | 1184514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3218240 |
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| End bp | 3219619 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637394224 |
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| Product | helicase domain protein |
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| Protein accession | NP_792661 |
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| Protein GI | 28870042 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00993541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATGCTT CAGAGAAAAT CCTCAACGCC CGCGCCTGGC TAAACTCAGA ACCAAAAGTG
ATCGGACTGC GCGATGAGGG TCTTTGGTCG GACTTGCATG ACCGGATTAT CGAAGGGGCG
TCTTACTTCC GTACTGCGGA GCACTCTGCC CAACAACCCA AAGCCAAGCT CAAGTCCTAC
GAGACTCAGT TCCGTTCAGG TCACATCAAT CTGTTGAGCT GCTCGACCAC CATGGAGATG
GGTATCGACA TCAGCGGTAT CACGGCCGTC GCGATGAACA ACGTACCGCC CCAGACGGCA
AACTACTTGC AGCGGGCAGG CCGGGCGGGA CGACGCGGGG AAGGACGCGC GGTTGCGTTA
ACCATTTGCC GCAAGACACC CCACGACCAG CACGTGTTCG CCAAGCCCCG GTGGCCGTTC
GATACAAACA TGATCATTCC GGCCGTCTCA CTGCGAAGCC CAGATCTGGT CGCGCGCCAC
GTCAACTCCT ACCTTTTGTC TTACTGGCTC AAGACAGTAT TGGGGCGAGA GGAGCTCAAA
AGCATGACTA TAGGCCCCTT CTGCATCGAG GAAGGTGGCG ATTCCCTGGC GGGTCGATTC
GAAGCTTGGT GCACGAATAC CGCGGGCATT TTGCCGGCTG TCATCAAAGG GATTGAGAAG
CTGGTTCACC GCAGCCCGCT CGTGGACATG AACTCTGAAA CGCTAACTCG CCACACCGCA
GCCGCAATGC GAGATGTCGC GCAGAGCTGG AGGGAGGATT ACAACAACGC CAGTCAGGAG
CTCGGCTACT TCAAAGGCTG CTCAGAAAAG AAGAGCGCGG CATTGCGTGC GCTGAATGCT
CAGCTGGAGC GGATCACCGG TGAGTACCTG TTGAGTGAGC TGGCAACTCG CCGGTTCCTG
CCAGGTTACG GTTTTCCCAC AGACATCGTC AGCTTTAACA ACATCATCAG ACAGCCCCCG
GACAAAGCGC GAGAATACTC GCGCGAAGAT AACCGCGGGC GCTACCTAGA TCTCGCGACA
CGAGACCGTG TAACCGGGCT GAGAGAATAT GCACCTGGCG CCGAAGTTGT CATGGACGGT
TGGGTTTATG AGTCGCGGGG TATCTCACTC AATTGGAGGC TTCCCGCGTC CGAAGAAATC
CTGCGTGAAG CGCAGCTTTT CAAGTATGCG TGGCGTTGCT CCCATTGCGG CGCAAGCGGG
AGTACCTTTG CGCAACAACC GGGCGACTGC GGGCAGTGTG GAAGTCCCTT GGACGAGCAG
GAAGATGTTC TGCGCTATCT GGTGCCTTCA GGGTTCGCGG TGGACTTCTA CGGTAAGGAT
CCGCACACAG ATATCAGTAA GCCTACCTAT ATCCCCGTCC AGCGCCCTTG GCTACGGTGA
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| Protein sequence | MDASEKILNA RAWLNSEPKV IGLRDEGLWS DLHDRIIEGA SYFRTAEHSA QQPKAKLKSY
ETQFRSGHIN LLSCSTTMEM GIDISGITAV AMNNVPPQTA NYLQRAGRAG RRGEGRAVAL
TICRKTPHDQ HVFAKPRWPF DTNMIIPAVS LRSPDLVARH VNSYLLSYWL KTVLGREELK
SMTIGPFCIE EGGDSLAGRF EAWCTNTAGI LPAVIKGIEK LVHRSPLVDM NSETLTRHTA
AAMRDVAQSW REDYNNASQE LGYFKGCSEK KSAALRALNA QLERITGEYL LSELATRRFL
PGYGFPTDIV SFNNIIRQPP DKAREYSRED NRGRYLDLAT RDRVTGLREY APGAEVVMDG
WVYESRGISL NWRLPASEEI LREAQLFKYA WRCSHCGASG STFAQQPGDC GQCGSPLDEQ
EDVLRYLVPS GFAVDFYGKD PHTDISKPTY IPVQRPWLR
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