| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2853 |
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| Symbol | |
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| ID | 1184507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3204648 |
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| End bp | 3207002 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637394218 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_792655 |
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| Protein GI | 28870036 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0123555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCCTG CTCACAATCG ACAAGTCGCG ACCTTACGCC AGGTTGTATC TCTCGCGCTT
AAATCGTTAC CGGTGGCCTC CAGCAAACCC TCGTGCATCC CCCTTGGGGC TTCCGTTGCT
CTGAAATTTA TTGTCCAGGC TGGCTGCTTT GCAGACAGCC TGAGCACTTA TCGAATGAAA
AACTGGAAGC TCTCTATGTT TCGCATGACG ACTCTGGCGC TGCTCGTTGG CAGCAGCCCC
CTTGCTTGGG CTCAAGATGA TTCCTTGAAA CTGCCCGACA TTAAGATATC CACTTCTGCT
GCCGAACCCG TTGAGGCGAC CGCTCTCAAC CTGGACGAGA CCATCGAGAG CGGCTCGCGT
CTAACGCTCA GTGCGCGCGA GAACCCCGCA TCGGTCAGCG TGGCAGACCG CCAGACCATG
GAACGTATCG GAGCGCGCAA CTTTCAGGAT GCTGCTAATG CGCTGCCTGG CGTGAATGCA
TCCGCACCAC CTGGTTGGGG AGGTTATGTG GCCTATCGTG GATTCAATGG TGCGCAGATT
GGTCAGTTGT TCAACGGCAT TAATTTGCAA TACGGAGCCG CTGCGCGTCC TGTCGGATCA
TGGATTTACG ATCAAGTTGA GCTACTGGGC GGGCCATCTT CCTTTCTCAA TGGCAGTGGT
GCGGTGGGCG GTAGCCTGAA TTTCATCACC AAGTTGGCCA GCCGTGACAA GGACAGTCTT
GAGGGAAGGG TGAGTTACTC GCGCTACGAC ACTTGGGAGA CCGCCATCGG CGTCAACCAG
GCGCTCAACG AGGGGGAAGG AGCTCGCCAT TATGCGCGTC TGGACTACAG TCGCACGCAC
ACCAATGGTT ATATCGATCG TCAGGAGAAT GGAGCTGGCA ATCTGGCGTT CTCCCTGCTG
AGCGATATCA ACGACCAGCT TTCCCACACA CTCGCCATCG AGTATCTGGA GGAGCAGGAA
GACAGCCCGT ACTGGGGCTC GCCAGTGTTA CAGCCACTGA GCGGCAAACT TCATATTGAT
AAGCACAACC GTTTCAAAAA CTATAACGTC GATGATGGGC GCTACGAGCA GAGAACTCGT
TGGCTGCGGT CGATCACCGA CTACCGTTTC GATGATGCTA CCGGGGTTCG CAATACCTTC
TATCACTATG ACGGTCAGCG CGATTACCGC AATCTTGAGG TCTATCGCTT CAACGCGGGT
AACAACGCCG TGGCTCGCTC TGCAGGCTAT CGCCAGCGTC ATGATCAGGA GGTGAACGGC
AATCGTCTGG AGCTGACGCA CGCGGGGGAG TTGTTTGGGA TGGCCAGTGA CTGGGCCTTT
GGCATGGAAT ACAGCCGCAA CAAACAGGTC AACTATCCGC TGTCCATCAA TGGGTCTTTC
GGCGTTGCGG TAGACCCGGG CAGTTTCGCT CCAGGTGCGT TTCTCGACAT CCCCGGCATG
GATGCCGCAC GTACCAAGGG CCGCAGCACC TGGACGGATA CCACGTCGAC TTTTATGGAA
AATCGCACGC GCCTGACGGA TCGACTGGCA TTGGTTACAG CACTTCGCTA TGACCACATT
GATTTCGAGA TTGTCGACCA CACGGCGCGC AGTTCACTTG ATCGCCGCTG GGACGCCTTT
ACCGGCCGGG CAGGTCTGGT CTATGACGTG ACCGATAGCG CCAGCCTCTA CACCCAGTAC
AGCACCTCGG CCGAGCCGCC AGGCGGAACC CTGACCAGCG CAAGCATCGG CCAGGTCGGC
GACTTCGATT TGAGCACCGG ACGCCAGATT GAGGTGGGCA GCAAATTCGA CTTCCTTGAT
GGCCGCGGAT CTGCCACAGC AGCAGCCTAT CGAATCGTGC GCAAGAACAT TTCTGTACCC
TCTTCCACAC TGCAGAACAC CACCGAGCAG GCAGGCCAGC AGACCTCTAC GGGTATCGAG
TTGGCGGCAT CGTTCAAGAT AACTCCCCAG TTGTTGGCTG CCGGTAATTT CGCCTGGGTG
AGGGCCGAAT ACGACGAATT CAATGAGACC GTCGCCGGCG CGGTGCTTTC ACGCAAGGGT
AAGAACCCGG TGAACATTCC GGATCGCACG GCCAACCTCT GGCTGACGTA CGATTTGGCA
CCGCAGTGGC AGGTCGGCGC TGATGCGCGC TACGTCTCTT CGGTCTACGC CAATACCGCC
AACACTATGT GGGTGCCGTC CTACACGGTC TACGGATTGC TCCTCAAGCA TGACCTCGAT
GCGCATACAG AGCTGAGTGC GCGTTTGCGT AACCTCACGG ACGAGACCTA TGCACGCTTC
ATTCATCAGA CCAACACTCA GTATTACCTG GGTGAGCCGC GCAGCCTCGA AGTGGCTGTG
CAGTGGAGAT ACTGA
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| Protein sequence | MGPAHNRQVA TLRQVVSLAL KSLPVASSKP SCIPLGASVA LKFIVQAGCF ADSLSTYRMK
NWKLSMFRMT TLALLVGSSP LAWAQDDSLK LPDIKISTSA AEPVEATALN LDETIESGSR
LTLSARENPA SVSVADRQTM ERIGARNFQD AANALPGVNA SAPPGWGGYV AYRGFNGAQI
GQLFNGINLQ YGAAARPVGS WIYDQVELLG GPSSFLNGSG AVGGSLNFIT KLASRDKDSL
EGRVSYSRYD TWETAIGVNQ ALNEGEGARH YARLDYSRTH TNGYIDRQEN GAGNLAFSLL
SDINDQLSHT LAIEYLEEQE DSPYWGSPVL QPLSGKLHID KHNRFKNYNV DDGRYEQRTR
WLRSITDYRF DDATGVRNTF YHYDGQRDYR NLEVYRFNAG NNAVARSAGY RQRHDQEVNG
NRLELTHAGE LFGMASDWAF GMEYSRNKQV NYPLSINGSF GVAVDPGSFA PGAFLDIPGM
DAARTKGRST WTDTTSTFME NRTRLTDRLA LVTALRYDHI DFEIVDHTAR SSLDRRWDAF
TGRAGLVYDV TDSASLYTQY STSAEPPGGT LTSASIGQVG DFDLSTGRQI EVGSKFDFLD
GRGSATAAAY RIVRKNISVP SSTLQNTTEQ AGQQTSTGIE LAASFKITPQ LLAAGNFAWV
RAEYDEFNET VAGAVLSRKG KNPVNIPDRT ANLWLTYDLA PQWQVGADAR YVSSVYANTA
NTMWVPSYTV YGLLLKHDLD AHTELSARLR NLTDETYARF IHQTNTQYYL GEPRSLEVAV
QWRY
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