| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2851 |
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| Symbol | |
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| ID | 1184505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3201393 |
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| End bp | 3201959 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637394216 |
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| Product | SCO1/SenC family protein |
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| Protein accession | NP_792653 |
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| Protein GI | 28870034 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000861503 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGGTTAC TCAGCTTGAG CATCTTGACT GGGTGCGATA CCCGCGAGGA ATTGACGTAC
AAACACGGCA AAAATCTGAG TAATCAGATC CTTGGGCGCT CATTTAAATT AAAAGACACT
AACGGCGACC TCAGAATGCT CTCGAGTTAT CGAGGGATGA TCCCCTTGGT ATTCTTCGGA
TTTACACAGT GCCCCGCGAT TTGCCCGACG GCTCTGGCTC GCGCAGTACA AATCAAAAAA
CTGATGGGCA AGGATGGCGA CAGACTTCAG ATCATCTTTA TCACGCTGGA TCCTGAACGC
GATACACCAG CCGTGCTCAA CGCTTACGTG AAAACGTTTG ATCCGTCATT TGTCGCACTT
TACGGGACAC TCGAAGAAAC TGCGGCCACA GCCAAAGAGT TTGGCGTGTT CTACGAAAAA
ATCCCCAGCG GATCAACCTA CACGTTATCC CATTCGGCGA CGAGCTATGT ATACGACATC
AGGGGAACCC TACGTCTTGG ATTGTCTCAC TCGCTTTCAG CACAAGAGTG TGCAGAAGAT
TTGCTTACCG TCATGAAGGT GTCCTAA
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| Protein sequence | MGLLSLSILT GCDTREELTY KHGKNLSNQI LGRSFKLKDT NGDLRMLSSY RGMIPLVFFG
FTQCPAICPT ALARAVQIKK LMGKDGDRLQ IIFITLDPER DTPAVLNAYV KTFDPSFVAL
YGTLEETAAT AKEFGVFYEK IPSGSTYTLS HSATSYVYDI RGTLRLGLSH SLSAQECAED
LLTVMKVS
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