Gene PSPTO_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2850 
Symbol 
ID1184504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3200905 
End bp3201393 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID637394215 
Producthypothetical protein 
Protein accessionNP_792652 
Protein GI28870033 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000551875 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAA CTCTCAATCA AGCCAGCATT ACTCAACGCG TCAGACAGTT CATACTTGGG 
TTTTCACTGC TGGGACTGGC TTGCCAAGTT TCAGCCCAGA CGCAAGTAGA AGATGTGTGG
GCTCGCGCTA CAGTCGCAGG GCAGCAGGCG ACCGGCGCGT TCATGACTAT TACATCAAGC
AGCGACAGCA AGCTGCTCAG CGCCCAGTCT CCGGTCGCCA AAATTGTGCA GCTTCACCTG
TCAACCATGA AGAACGACGT GATGAGCATG CAACCGGTAG AGTTTATCGA CTTGCCTGCT
GGCAAGCCGG TCACCTTGGA TCCCCACAAA TATCACGTCA TGCTGATTGA CCTGGTTAAG
CAAGTCAAAG AAGGTGACAA GGTACCGCTG ACGCTAACGG TAGAGAATGC CAGAGGTGAG
AAGGAGTCGA TAACGGTTGA GGCAACAGCG CGGGCTCTGA ACATGCCGGA TCACAGCAAG
ATGCATTGA
 
Protein sequence
MNSTLNQASI TQRVRQFILG FSLLGLACQV SAQTQVEDVW ARATVAGQQA TGAFMTITSS 
SDSKLLSAQS PVAKIVQLHL STMKNDVMSM QPVEFIDLPA GKPVTLDPHK YHVMLIDLVK
QVKEGDKVPL TLTVENARGE KESITVEATA RALNMPDHSK MH