Gene PSPTO_2844 details

Gene Information

• Locus tag: PSPTO_2844
• ID: 1184498
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 3195189
• End bp: 3195731
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637394210
• Product: hypothetical protein
• Protein accession: NP_792647
• Protein GI: 28870028

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00191455
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTGTCCTG ACTACCCTAG CAATGCATGT TGTTTTACTC GCCTGGATGT CCGGCTACTG 
CCGCACTGGC ACGCGTTGTT CGATGTATGT CCTGCGTTGC TCAAGCTGGA TCCTCCGGAA 
GGCTTGAACA TGTTTCGCAG TTTCATGAAG TGGGCATGCC GCAATTCCCC GGCCCTGAAC 
TGGACTTACC ACCTGAGTGT ATGTCGTTGG TTGCTCACTT CATCTTTTAA GAAGCATATA 
CGCGAGGAAC ATATCGAGGC CCTCATGACT GCTGCAGCAG CCAGTTGGGT AGAGGCTGAC 
GACGGCCCGG CTCGCGGGCT AGTGTTGGCG TGGAAAGGCT CGCCGCTGCG GGTGTTTGAC 
TGGAAAGTCG AGGCTCGTCG TGGCGATGAA GTAGACCCTC AGCAGCAGGT GTTTCCACCA 
ACGCCCTGGG ATTTTGCCTG GTGCCCATTA GCAGGCGAGG GCTCCGCTGG ACTGCGACAG 
TGGATGCCCA TCCCTGGATA CGACGGGCAA CCGCCGTTAT CGAACGCTGT GCGCGAAGAG 
TAG 

 

Protein sequence

MCPDYPSNAC CFTRLDVRLL PHWHALFDVC PALLKLDPPE GLNMFRSFMK WACRNSPALN 
WTYHLSVCRW LLTSSFKKHI REEHIEALMT AAAASWVEAD DGPARGLVLA WKGSPLRVFD 
WKVEARRGDE VDPQQQVFPP TPWDFAWCPL AGEGSAGLRQ WMPIPGYDGQ PPLSNAVREE