| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2816 |
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| Symbol | |
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| ID | 1184470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3141276 |
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| End bp | 3141866 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394183 |
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| Product | alkylhydroperoxidase AhpD domain protein |
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| Protein accession | NP_792620 |
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| Protein GI | 28870001 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0335697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAGC TTATTGAAAT CGAAGGTTTC ACCAATCAGG TGCTGGGCTG GAAAGCATGG
TTACCGATCG TGGACCTGAA CAACGCCACT GCCGAGCAGA CCGCTGTGCT CGAAGAGAGC
CATCCGCAGG CCAGGACCTC GGATTACTAC CTGACCCTGG CGCACCACCC GGACATCCTT
CGGCAGCGCT CCCAGGCTTT CAACGCCATC ATGTACGCGC CGGGCGGCCT GTCCCGTGCC
GAGCGAGAGC TGGCCAGCAC CGTGGTCTCG CGCATCAACC GCTGCGTGTA TTGCGCATCG
GTGCATGCAC AGCGTTTCGA GCAGTTGGCC AAGCGCAATG ACGTGATCGC ACAGGTCTTC
GCCGACCCGG CAACGGCAGG CACCACGGCA CGCGAAAAAG CCATTGTGCA GTTCGCCATC
GACCTGACCC TTGAGCCTGC CTCGCTCAAC GCCGCGCACA TCATAGCGTT GCGTGAGCAG
GGCCTGGACG ATGCGCAGGT GCTGGATTTG ATTCACGCCA TCGCGATCTT CGCCTGGGCC
AACCGGCTGA TGCTCAATCT TGGCGAGCCG GTGTTTCCCG AAGCTGAATA G
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| Protein sequence | MSELIEIEGF TNQVLGWKAW LPIVDLNNAT AEQTAVLEES HPQARTSDYY LTLAHHPDIL
RQRSQAFNAI MYAPGGLSRA ERELASTVVS RINRCVYCAS VHAQRFEQLA KRNDVIAQVF
ADPATAGTTA REKAIVQFAI DLTLEPASLN AAHIIALREQ GLDDAQVLDL IHAIAIFAWA
NRLMLNLGEP VFPEAE
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