Gene PSPTO_2798 details

Gene Information

• Locus tag: PSPTO_2798
• ID: 1184452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 3120003
• End bp: 3120638
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637394166
• Product: transporter, putative
• Protein accession: NP_792603
• Protein GI: 28869984
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0598] Mg2+ and Co2+ transporters

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00161167
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTTATCT GTCCTGACGA TCAGCCCCTG AGCGCGCTGG GGGCTCATCG TCCGCTGAAC 
CAGCCACTGG ATATCCTCCT GGAATTGCTG TTCAACAACA TTCACCACTA CTTGGGCCAC 
CTGAAGGTCA TCAAGATGGT CGCGCGGGAA TTGCAGCACA AATTCAACTC GTCACTGGAA 
AACCGCCACT TGCTGCAGAT GTTCAACCTC AGCGAAAGCC TGGTGTATTA CATCAACGCC 
ATCCACAGCA ACGGCGCGGT GCTGACGCGC CTGCGCAATC ATGCGCAAAA CAAGCAATAC 
GGCGCGGCCA GCCTGGCGCT GATCGACGAC ATGATCATCG AGAACGACCA GTGCTACAAA 
CAGGCGGAAA TCTACTCCAC GGTGTTCGCC GGGCTGATGG ACGCGCGGGG CAATCTGGTC 
AATAACAGCA CCAACACCCT GCTGCGCAAA CTGACCTTGA TCAACGTGGT GTTTCTACCC 
TTGAACCTGA TCGCCGGGAT CGGCGGCATG TCCGAGTTCA GCATGATGAC CGCCCCGCTG 
CACTGGTGGG TGGCCTACCC GGCGTTGCTG TTGGCAATGC TCGGGCTGGG GGCGGTGATG 
GTCTGGGGGC TACGCAAAAT GGCCCGTTCG GCCTGA 

 

Protein sequence

MLICPDDQPL SALGAHRPLN QPLDILLELL FNNIHHYLGH LKVIKMVARE LQHKFNSSLE 
NRHLLQMFNL SESLVYYINA IHSNGAVLTR LRNHAQNKQY GAASLALIDD MIIENDQCYK 
QAEIYSTVFA GLMDARGNLV NNSTNTLLRK LTLINVVFLP LNLIAGIGGM SEFSMMTAPL 
HWWVAYPALL LAMLGLGAVM VWGLRKMARS A