Gene PSPTO_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2793 
Symbol 
ID1184447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp3111175 
End bp3111795 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID637394161 
Producthypothetical protein 
Protein accessionNP_792598 
Protein GI28869979 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.274129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCCG TCGTCAGCCT CGATGCCTTG CTGGACGAGC GCAGGGTCTG GAAGGGGCGT 
CAGCAGAGTA CGCCGCAGGT CAGCCCGCAC CCCAGCGGTC ATGCGGCGCT GGACAGTGCC 
TTGCCCACCG GCGGCTGGCC TGCCTCGGCG CTGACCGAAA TCCTCATCCC GGCCAACGGC 
AGTGGCGAAC TGCGCCTGCT GTGGCCGAGT CTGGCGCGGC TGTCCGCTAT CGGCGAGCGC 
ATCGTACTGG TCGCACCTCC TTACATTCCC TATCCGCAGG CCTGGCTGGC TGCCGGGGTC 
GATCTGCGTC AACTGGTGGT GATTGAGGCG AGCACCCGCG ATGCCCTGTG GGCCGCGGAA 
CAATGCCTGC GCTCCGGCAG TTGCGGTGCG GTGCTGTGCT GGCCCGGCAT GGTCGATGAC 
CGCGCATTGC GCCGCTTGCA GGTCGCCGCC GAAACCGGGC AGACCCTGGC CTTTACCTGC 
CGCCCTCAAC AGGCTGCCGC CAACCCTTCG CCAGCGGCAC TGCGTATAGC CGTCGATACC 
CGGCCCGCAC AATTGCGGGT GCTCAAGTGC CGGGGCGGGC TTGCGCCGTC TTTGCCCATT 
CCATTCCCGA CCGACGCTTG A
 
Protein sequence
MGAVVSLDAL LDERRVWKGR QQSTPQVSPH PSGHAALDSA LPTGGWPASA LTEILIPANG 
SGELRLLWPS LARLSAIGER IVLVAPPYIP YPQAWLAAGV DLRQLVVIEA STRDALWAAE 
QCLRSGSCGA VLCWPGMVDD RALRRLQVAA ETGQTLAFTC RPQQAAANPS PAALRIAVDT 
RPAQLRVLKC RGGLAPSLPI PFPTDA