Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2781 |
Symbol | |
ID | 1184435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3098807 |
End bp | 3100042 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637394149 |
Product | hypothetical protein |
Protein accession | NP_792586 |
Protein GI | 28869967 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.609631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCG TCGTCATGGA CACCGCTGTT ATGAACATCG CGGTTATGGA AAAAGGGGCT GCTCAGCCGG GTGACCGCCT GCTCAGTGAT GTCAGTCTGC CTGCACTGGT TATCCACAAT CAGGCGCTGG AGCACAACAT TCGCTGGATG CAACAGTTTG TCACCGACAG CGGCGCCGAG CTGGCGCCGC ATGGCAAGAC CAGCATGGTC CCCGCGCTGT TTCGTCGCCA ACTGGACGCG GGTGCCTGGG GCATGACGCT GGCGACGGCC ATCCAGACTC AGACCGCGTA CGCCCACGGT GTGAAGCGCG TGCTGATGGC CAACCAGTTG GTGGGTGCGC CCAACATGGC GGTGATCGCC AGTCTGCTGG CCGATCCGAT GTTTGAATTC CACTGCATGG TCGATCACCC CGACAACGTC GCGGCGCTGG GCGAGTTTTT TGCGGCGCAC GGGCTGCGCT TGAACGTGAT GATCGAATAC GGCGTGCCAG GTGGGCGCTG CGGGTGCCGC AGCGAAGCCG AGGTGCTGGC CCTGGCGGAT GCCGTTCAGG CGCAACCGGC GCTGGCGCTG AGCGGAATCG AAGGTTACGA GGGCGTCATT CACGGCGATC AGGCGATTGC CGGCATCAAG GCCTTCGCGG CATCGCTGGT CAGCCTGGCG GTCAACCTGC AGGACAAGGG CGCGTTTGCG CTTGATCGCC CGATTGTCAC TGCGTCGGGC TCGGCCTGGT ACGACCTGAT CGCCGAAGCA TTCGACGCCC AGGCGGTTCG CGATCGGTTT CTCAGCGTGC TGCGCCCCGG CAGCTACGTG GTGCATGACC ACGGCATCTA TAAAGACGCG CAATGCTGCG TGCTGGACCG ACGCGCCGAG TTGAGCGAAG CGCTGCGTCC GGCGCTGGAG GTCTGGGCGC ATGTGCAGTC CATGCCTGAG CCGGGCTTTG CCGTGATTGC CATGGGCAAG CGCGATGTGG CCTACGATGC AGGCTTGCCC AACCCGTTGT TGCGCTACAC ACCGGGCGTA TCGTCAGCAC CGGGCGATGA CGTCAGCGCC TGCAAGGTCA CTGCGGTGAT GGATCAGCAC GCCTTCATGA CGGTCGCTGC GGATTGCGAA TTGAAGGTGG GTGACATCAT TTCCTTCGGC ACCTCACACC CGTGTCTGAC CTTCGACAAG TGGCGTTCAG GTTGTCTGGT GGATGATGAC CTGCGGGTGA TCGAGCCTTT TCATACCTGT TTCTAG
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Protein sequence | MSTVVMDTAV MNIAVMEKGA AQPGDRLLSD VSLPALVIHN QALEHNIRWM QQFVTDSGAE LAPHGKTSMV PALFRRQLDA GAWGMTLATA IQTQTAYAHG VKRVLMANQL VGAPNMAVIA SLLADPMFEF HCMVDHPDNV AALGEFFAAH GLRLNVMIEY GVPGGRCGCR SEAEVLALAD AVQAQPALAL SGIEGYEGVI HGDQAIAGIK AFAASLVSLA VNLQDKGAFA LDRPIVTASG SAWYDLIAEA FDAQAVRDRF LSVLRPGSYV VHDHGIYKDA QCCVLDRRAE LSEALRPALE VWAHVQSMPE PGFAVIAMGK RDVAYDAGLP NPLLRYTPGV SSAPGDDVSA CKVTAVMDQH AFMTVAADCE LKVGDIISFG TSHPCLTFDK WRSGCLVDDD LRVIEPFHTC F
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