| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2777 |
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| Symbol | |
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| ID | 1184431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3095997 |
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| End bp | 3096659 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394145 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | NP_792582 |
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| Protein GI | 28869963 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.449808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATCAAC CCCCTGGCTG GTTGCAGGAA TTGTGGGCTG CGCGGGAAGT GCTCTGGGCC
GGCTTTCTGA CCAGTATTCA GTGCTCGGCG CTGGCGATTG TGGCGGGCAC GCTGATCGGC
ATGCTGGCCG GTCTGGTGCT GACCTACGGC GGGTTTTTCG CACGCTTGCC GATCCGGCTG
TACGTCGATC TGATTCGCGG CACACCGGTA TTCGTTCTGG TGCTGGCGGT CTTTTATATG
GTGCCGGCGC TGGGTTGGCA TATCAGCGCG TTTCAGGCCG GGGCGATAGG CTTGACCCTG
TTCTGCGGCT CACATGTTTC GGAAATCGTG CGCGGTGCGT TACAGGCCAT CCCACGTGGG
CAAATCGAGG CGGGCAAGGC GATTGGCCTG CGCTTCAATC AGACGCTGCG CTATGTGCTG
CTGCCTCAGG CCATGCGCCA GATTCTGCCG ACCTGGGTCA ATTCCTCGAC CGAGATCGTC
AAGGCCTCGA CCCTGTTATC GGTGATCGGC GTGGCCGAGT TGCTGCTGAG CACCCAGCAG
GTGATCGCCC GCACGTTCAT GACCCTGGAG TTCTACCTGT TCGCAGGTTT TCTGTTTTTC
CTCATCAACT ACGCCATCGA GCTTCTTGGG CGACACATTG AAAAACGGGT GGCCTTGCCA
TGA
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| Protein sequence | MYQPPGWLQE LWAAREVLWA GFLTSIQCSA LAIVAGTLIG MLAGLVLTYG GFFARLPIRL
YVDLIRGTPV FVLVLAVFYM VPALGWHISA FQAGAIGLTL FCGSHVSEIV RGALQAIPRG
QIEAGKAIGL RFNQTLRYVL LPQAMRQILP TWVNSSTEIV KASTLLSVIG VAELLLSTQQ
VIARTFMTLE FYLFAGFLFF LINYAIELLG RHIEKRVALP
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