Gene PSPTO_2764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2764 
Symbol 
ID1184418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3084908 
End bp3086140 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content61% 
IMG OID637394132 
Producttransporter, putative 
Protein accessionNP_792569 
Protein GI28869950 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0479681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGGC ACTCCAACCG CCTGCCAGCG AAGAGTCCAA TGCCTGCCGC GCAATCCGGT 
TCCACGACGA TTACCCTGCA AATCGTCTCC ATCGTCTTCT ACACGTTCAT CGCCTTCCTG
TGCATCGGTC TGCCTATCGC GGTACTGCCC GGTTACGTCC ATGATCAACT GGGTTTCAGC
CCGCTGATTG CCGGTCTGGC CATCGCTTCG CAGTACCTCG CCACCCTGCT CAGCCGGCCG
TTTGCCGGCC GGGCGACAGA CTCGTTGGGC AGCAAGCGCT CCATCGTGTT CGGGCTGTGG
GGCATCGGTA TCAGCGGTGT TATGACACTG CTGGCAACTC TGCTTGAGGA TTTTGCGACG
CTCAGCCTGT CGATTCTGAT CGTGGCACGG CTGTTTCTCG GTGTGTCTCA AGGGCTGATC
GGGGTTGGTA CCATCAGTTG GTGCATCGGC AAGGTCGGTG CAGAGCACAC GGCCCGCTCG
ATCTCCTGGA ACGGCATTGC CTCCTATGGC GCGATCGCCA TTGGTGCACC GCTGGGGGTG
GTGGTCATCG ACGCGGTTGG CTTCAACAGC CTGGGTGTGG CCCTGATAGT GATGGCAGGC
CTGGCGCTGG TGCTGATCCG CAACAAGCCT TCGGTACCCA TCATTGCAGG CGAGCGCCTC
CCCTACTGGT CGGTGTTTGG CCGTATAGCA CCTTACGGGC TGGGCCTGAC CTTGTCGTCA
ATCGGCTATG GCACGCTGAC CACTTTTATT ACGCTGTTTT ACCTGAGCCG TGGCTGGCAA
GGTGCGGCGT ATTGCCTGAG CATGTTTGGC GTGTGTTTTA TCCTCGCCCG CCTGCTGTTC
ATCGGTGCCA TCAATCGGCT TGGTGGCTAC AACGCCGCCA TCCTGTGCAT GGCCGTTGAG
ATCTGCGGTC TGGTCATGCT CTGGCTTGCG CCCAACACCG GTTTCGCACT GGCAGGGGCC
GGCCTGACCG GTGTCGGGCT GTCGCTGGTG TACCCGGCGC TTGGCGTGGA AGCGATCAAA
CGCGTGCCGA CGCCCAGCCG TGGCGCAGGC CTGAGTGCCT ATGCCGTGTT CTTCGACCTG
GCCCTGGCCA TCGCAGGCCC GGTGATGGGC GCGATTGCCC TGGGGCAAGG TTATGACTGG
ATCTTTTTCT ATGCGGCAGT GCTGTCGGTA TGCGCGCTAG GCCTGACGCT CTGGTTGTCA
CGCCGGGCCA GTCAGCAGGC GCAAAGCGTT TGA
 
Protein sequence
MMRHSNRLPA KSPMPAAQSG STTITLQIVS IVFYTFIAFL CIGLPIAVLP GYVHDQLGFS 
PLIAGLAIAS QYLATLLSRP FAGRATDSLG SKRSIVFGLW GIGISGVMTL LATLLEDFAT
LSLSILIVAR LFLGVSQGLI GVGTISWCIG KVGAEHTARS ISWNGIASYG AIAIGAPLGV
VVIDAVGFNS LGVALIVMAG LALVLIRNKP SVPIIAGERL PYWSVFGRIA PYGLGLTLSS
IGYGTLTTFI TLFYLSRGWQ GAAYCLSMFG VCFILARLLF IGAINRLGGY NAAILCMAVE
ICGLVMLWLA PNTGFALAGA GLTGVGLSLV YPALGVEAIK RVPTPSRGAG LSAYAVFFDL
ALAIAGPVMG AIALGQGYDW IFFYAAVLSV CALGLTLWLS RRASQQAQSV