| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2762 |
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| Symbol | glgB |
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| ID | 1184416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3079691 |
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| End bp | 3081916 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394130 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | NP_792567 |
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| Protein GI | 28869948 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.184347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCGC CTGACAAAAC CGGCACGGAT CGCCGTGCGG TTCCCGCTGC TGTGGACCTT
GATGCGCTGA TTCGTGCAGA ACACCGTGAC CCGTTTTCGA TTCTTGGCCC GCATGACGAC
GGCAAAGGCG GGCAATATGT TCGTGCCTAT CTGCCCGCAG CGCTGAGCGT ACGCCTGCTG
GCCAGAGATG ACGGCCGCGA ACTGGCCGAA CTGCACATGA GCGACGTGCC GGGTTTTTTC
GTCGGTCATC TTGAGCAGCC ACAGCCGTAT CTGTTGAAAA TCAACTGGGC GGGCGGCGAG
CAGATCACCG AAGACCCCTA CAGCTATGGT CCGCTGCTGG GCGAAATGGA CCTTTACCTG
TTTGCCGAAG GCAATCACCG CGATCTGAGC AGTTGCCTGG GCGCGCAAGT GACCAGCGTT
GACGGTGTCG AGGGTGTGCG CTTCGCTGTC TGGGCACCGA ACGCCCGCCG GGTTTCCGTG
GTCGGCAGCT TCAATGGCTG GGATGGCCGT CGCCACCCGA TGCGTCTGCG TCACCCGACC
GGCGTGTGGG AGATCTTTGT TCCGCGTCTG CAACCGGGCG AGGTCTACAA ATACGAGATT
CTGGGTGCTC ACGGGATTCT GCCGCTCAAG AGCGACCCGA TGGCCCTGGC CACTACGCTG
CCGCCCGATA CGGCGTCGAA GATTTCTGCG CCACTGAAGT TCGAGTGGCA TGACCAGGAC
TGGCTGCAAT CCCGGGCCGG GCGTCACGAC GTTGCTGCGC CATTGTCGAT TTATGAGCTG
CATGCCGGTT CGTGGCAGAT GGAACAGAAC GATGAAGGCC AATGGCGTCA GTACAACTGG
CGTGAGTTGG CTGACCGCTT GATCCCGTAC GTCAAAGAGC TGGGTTTCAC GCACATCGAG
CTGATGCCGA TCATGGAGCA CCCGTTCGGT GGTTCATGGG GCTATCAATT GCTCGCCCAG
TTCGCGCCGA CCGCCCGCTA CGGTTCGCCT GAAGATTTCG CCGCTTTCGT GGACGCCTGT
CACCAGGCAG AAATCGGCGT CATCCTCGAC TGGGTGCCTG CGCATTTCCC GACCGATACC
CACGGGCTGG CACAATTCGA CGGCACTGCG CTGTACGAAT ACGCTGACCC CAAGGAAGGC
TTTCATCAGG ATTGGGACAC GCTGATCTAC AACCTGGGGC GGACCGAAGT GCATGGCTTC
ATGCTGGCCT CGGCGCTGCA CTGGCTCAAG CATTACCACA TCGACGGCCT GCGTGTGGAT
GCGGTGGCGT CGATGCTGTA TCGCGACTAC TCGCGCAAGG CGGGCGAGTG GGTGCCCAAT
CGCTTCGGCG GCCGCGAGAA CCTGGAGGCC ATCGACTTCC TGCGTCACCT CAACGACGTC
GTTGCGCTGG AAGCGCCTGG CACTATGGTC ATCGCTGAAG AATCGACGGC CTGGCCGGGC
GTCAGCGAAT CGACGCAAAA AGGTGGTTTG GGCTTCAACT ACAAGTGGAA CATGGGCTGG
ATGCATGATT CGCTTCAATA CATGGAAGAA GACCCGATCA ACCGCGAGCA TCATCACGGC
AAACTGAGTT TCAGCCTGGT ATACGCGTGG TCCGAGCGCT TTGTGCTGCC GATTTCCCAC
GATGAAGTGG TGCACGGCAA GCATTCGCTG ATCGACAAGA TGCCGGGTGA TCGCTGGCAG
AAATTTGCCA ACCTGCGCGC CTATCTGGCG TTCATGTGGA CGCATCCGGG CAAGAAGCTG
TTGTTCATGG GCTGCGAATT CGGCCAGTGG CGTGAGTGGA ACCATGACGA GCAACTGGAC
TGGTACCTGA TGCAATACGC CGAGCACGTG GGTGTCAAGA AGCTGGTCGG TGACTTGAAC
CGCATTTACC GCGAAGAGAA GGCCCTGCAC CAGCGCGATG CCGACCCGAC CGGTTTCCAG
TGGTTGATCG GCGACGACAA GTCCAACAGT GTGTTTGCCT ATTTGCGCTG GAGCAATGAT
GGCGAACCGC TGCTGGTGGT CGCCAACATG ACGCCCGTGC CGCGTGAAGG CTATCGCGTT
GGGGTGCCGT TGCAGGGCGC GTGGACAGAA CTGCTGAACA GCGATGCAGA AACCTATGCC
GGCTCCAACA TCGGTAACGG TGGGGAAGTA ATCAGCGAAG ACGAGCCGGT TCATGGCATG
TCGGCTTCTC TGACACTGAA TCTGCCACCA TTGGCCGTGC TGATTTTCAA GCCCAAAAAA
GGCTGA
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| Protein sequence | MNAPDKTGTD RRAVPAAVDL DALIRAEHRD PFSILGPHDD GKGGQYVRAY LPAALSVRLL
ARDDGRELAE LHMSDVPGFF VGHLEQPQPY LLKINWAGGE QITEDPYSYG PLLGEMDLYL
FAEGNHRDLS SCLGAQVTSV DGVEGVRFAV WAPNARRVSV VGSFNGWDGR RHPMRLRHPT
GVWEIFVPRL QPGEVYKYEI LGAHGILPLK SDPMALATTL PPDTASKISA PLKFEWHDQD
WLQSRAGRHD VAAPLSIYEL HAGSWQMEQN DEGQWRQYNW RELADRLIPY VKELGFTHIE
LMPIMEHPFG GSWGYQLLAQ FAPTARYGSP EDFAAFVDAC HQAEIGVILD WVPAHFPTDT
HGLAQFDGTA LYEYADPKEG FHQDWDTLIY NLGRTEVHGF MLASALHWLK HYHIDGLRVD
AVASMLYRDY SRKAGEWVPN RFGGRENLEA IDFLRHLNDV VALEAPGTMV IAEESTAWPG
VSESTQKGGL GFNYKWNMGW MHDSLQYMEE DPINREHHHG KLSFSLVYAW SERFVLPISH
DEVVHGKHSL IDKMPGDRWQ KFANLRAYLA FMWTHPGKKL LFMGCEFGQW REWNHDEQLD
WYLMQYAEHV GVKKLVGDLN RIYREEKALH QRDADPTGFQ WLIGDDKSNS VFAYLRWSND
GEPLLVVANM TPVPREGYRV GVPLQGAWTE LLNSDAETYA GSNIGNGGEV ISEDEPVHGM
SASLTLNLPP LAVLIFKPKK G
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