| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2760 |
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| Symbol | |
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| ID | 1184414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3074330 |
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| End bp | 3076348 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394128 |
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| Product | alpha-amylase family protein |
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| Protein accession | NP_792565 |
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| Protein GI | 28869946 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.302132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAC AGCCATACGG TCCGGATTCC CTGGCCACCG ATGTACCGCA CCCAACCCAA
CCCTTGTCAC TCACCCAGGC GCTGCAATTG CCCCGCATCG TGATCGAAGA CACGTTGCCG
GTGATTGACG GTGGGTTGTT TGCGGCCAAG GCGATCATCG GGCAACCGGT CACCGTGACC
AGCAAGGTCT ACGCCGATGG GCATGACAAG ATGGCGGTGA ACATTCGCTG GCGCGCTGCC
GACGAAGAAA ACTGGCACAG CGCGCCGATG CACGAGCTGG GCAATGACAG CTGGATCGGT
GAATTCACCC CGACAGCTGT AAGCCGTTAC GTATTTCGCC TGGAAGCCTG GATTGACCAG
TTCGGCAGCT ACCGTTATGA GCTGGAAAAG AAGTTCGGTG CGGGTGTGCC AATCGATCTG
GAGCTGGAAG AAGGGCGCAT TCATCTGGTG CATGCCGCAG AGCGCAGCCA GGGTGACCAG
CGTAAACAGC TTGAAGGTCT GGCAGCTCAG CTTGCCAAGG GCGACAACGA CGAGAAAGTT
GCGCTGCTCT TGCACAGCGA CACAGCCAAT CTGATGAAGC AGGCCGATAA CCAGGCCTTC
TTGAGCCGCA GTGTGGAGTT CCCGCTGGAT GTCGAGCGTG AGCTGGCGCA ATTCGCCAGC
TGGTACGAGC TGTTTCCGCG CTCGATCACG GATGACAAGG CCCGTCACGG CACCTTCAAT
GACGTGCACT CGCGCTTGCC GATGATTCGC GACATGGGCT TCGACGTCTT GTATTTCCCG
CCGATTCACC CCATCGGTCG AGCACATCGC AAGGGGCCGA ACAATTCCCT GACCGCCGGG
CCGGATGATC CGGGCAGCCC GTATGCCATC GGCAGCGAAG ATGGCGGCCA TGAGGCTATT
CATCCGCAAC TGGGCAGCCG CGAAGACTTC CGAAACCTGG TGAAGGCCGC GGCTGAACAC
GGCCTGGAAA TCGCCCTGGA TTTCGCCATT CAGTGTTCGC AGGACCACCC GTGGCTCAAG
CAGCATCCGG GCTGGTTCTC ATGGCGTCCG GACGGCACGA TTCGTTATGC GGAAAACCCG
CCGAAAAAGT ACCAGGACAT CGTCAACGTT GATTTCTACG CGCCCGATGC GATTCCGGGC
CTGTGGCTGG AGCTGCGTGA CATCGTGCTC GGCTGGGTCA AGGAGGGCGT TAAAATCTTC
CGTGTCGACA ACCCGCACAC CAAACCGTTG CCGTTCTGGC AGTGGATGAT CGGTGAGGTG
CGCAGTCAGC ACCCTGAAGT GATGTTCCTG GCGGAAGCGT TCACCAAACC GGCGATGATG
GCGCGCTTGG GCAAGGTCGG TTACACCCAG AGCTACACCT ATTTCACCTG GCGCAACAGC
AAGGCCGAGC TGTCGGAGTA TTTCACCGAG CTGAACGAAG TGCCGTGGCG CGATTGCTAC
CGCCCGAATT TCTTCGTCAA CACACCGGAC ATCAATCCGC GCTTCCTGCA TGAGTCGGGT
CGCCCGGGCT TTCTGATCCG CGCGGCACTG GCAACCATGG GCTCCGGGCT ATGGGGCATG
TATTCCGGCT TTGAATTGTG CGAAGCGGCA CCGATTCCGG GCAAGGAAGA GTACCTGGAT
TCAGAGAAGT ACGAGGTTCG TGTCCGGGAC TATGCGGCCC CCGGCAATAT CATTGCCGAG
ATCGCCCAGC TCAATCGCAT TCGCAGGCAG AACCCTGCGC TGCAGACGCA TTTGGGGCTG
AAGCTGTACT CCGCTTGGAA CGACAATATT CTGTACTTCG GCAAGCGCTC GGCGGATGGC
AGCAACTTCA TTCTGGTGGC CATCAACCTG GACCCATTCA ACGCACAGGA AGCGGATTTC
GAGCTGCCAC TGTGGGAAAT GGGCCTTGCG GATGACGCCG CGACGTCTGG CGAAGACCTG
ATGACCGGGC ACCGCTGGAC CTGGTACGGC AAGTATCAGC ACACCCGTCT CGACCCGTCG
CAACCTTTTG GAATCTGGCG TATCCAGGCC GCGCACTAA
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| Protein sequence | MNEQPYGPDS LATDVPHPTQ PLSLTQALQL PRIVIEDTLP VIDGGLFAAK AIIGQPVTVT
SKVYADGHDK MAVNIRWRAA DEENWHSAPM HELGNDSWIG EFTPTAVSRY VFRLEAWIDQ
FGSYRYELEK KFGAGVPIDL ELEEGRIHLV HAAERSQGDQ RKQLEGLAAQ LAKGDNDEKV
ALLLHSDTAN LMKQADNQAF LSRSVEFPLD VERELAQFAS WYELFPRSIT DDKARHGTFN
DVHSRLPMIR DMGFDVLYFP PIHPIGRAHR KGPNNSLTAG PDDPGSPYAI GSEDGGHEAI
HPQLGSREDF RNLVKAAAEH GLEIALDFAI QCSQDHPWLK QHPGWFSWRP DGTIRYAENP
PKKYQDIVNV DFYAPDAIPG LWLELRDIVL GWVKEGVKIF RVDNPHTKPL PFWQWMIGEV
RSQHPEVMFL AEAFTKPAMM ARLGKVGYTQ SYTYFTWRNS KAELSEYFTE LNEVPWRDCY
RPNFFVNTPD INPRFLHESG RPGFLIRAAL ATMGSGLWGM YSGFELCEAA PIPGKEEYLD
SEKYEVRVRD YAAPGNIIAE IAQLNRIRRQ NPALQTHLGL KLYSAWNDNI LYFGKRSADG
SNFILVAINL DPFNAQEADF ELPLWEMGLA DDAATSGEDL MTGHRWTWYG KYQHTRLDPS
QPFGIWRIQA AH
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