| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2746 |
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| Symbol | |
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| ID | 1184400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3051325 |
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| End bp | 3052680 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394115 |
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| Product | OmpA family protein |
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| Protein accession | NP_792552 |
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| Protein GI | 28869933 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component
[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0862852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGACGC TGATGCTGCG CGCTCTGCTA ACGGCGCTGA TCCTGTCGAG CGCCACCCTG
CCTTTTGCTG TTCTGGCGGC CCTGCCAACG CCTGCCGGCG ATGGGCCTGC CTTGCGCATT
CAGGGCTCCA ATACCATCAA TGCTCAACTG GGGCCGGCGC TGCTTGAAGG GCTGATGCGC
CAGCAAGGCT TGCAAGCGGT GCAGACCGTT GCTGGCAACG TGACCAATGA ACAGCGCGTC
GTCGGCACCA GCGCGACAGG CCAGTTGGTC AGCGTCGAGG TCGCCGCCCA CGGCTCGGGC
ACCGGTTTCG CGGCCCTTAA AGCCGGTAAC GCGGACATTG CCGCCTCCTC CCGACCGATC
AAGGACCAGG AAGCCAGGGA ACTAAGCAGT TTCGGCGACC TGAAAAGCGC TGTTGGCGAG
CAAGTCATTG CTATCGATGG CGTTGCCGTG ATCCTGCATC CGGGCAACCC GCTGCGGCAA
TTGGACACGC TGCAACTGGC GCGCATTTTC AGCGGCGAAA TCAAGGACTG GAGCGAACTG
GGCGGCAATC CGGGGGCGAT TCATATTTAT GCGCGCGATG AAAAGTCCGG CACCTACGAA
ACCTTCAAGG AACTGGTGCT TGCCAAATAC GGCAAGAACC TCTCAGCCAC AGCGCTGCGC
TTCGAGTCCG GAGAGCAACT TTCCGATGAG GTCAGCAAAG ACCTCAATGG CATCGGTTTC
AGCGGCCTAC CATCAATCAG GCGCGCCAAG GCGGTGGCGA TAGCGGACGG CGACTCGCGG
CCCATGCTGC CGACCATCAG CCTGATTGCC ACCGAGGATT ATCCGCTGTC ACGCCGTCTG
TACCTGTATG TGCCGCCGTC GATTCACCAG CGCTGGGCGC AAGCGCTGGT GCGCTTTACG
CAAAGTGCCA AGGGTCAGGC CATTGTGGCG CAGAGCGGGT TTGTCTCGCA GACCGTGCAG
GCGCTCAAGG TGCCGCCGAC GGCACAGATG CCTGCGGATT ATCAGGCGTT GGCGCGCAAG
GCCGAGCGCC TCTCGGTCAA TTTTCGTTTC GCACAGGGCA GCGCCAGACT GGACAACAAG
GCGCAACAGG ACCTCAAGCG CGTCGCCGAG TACCTTAAAG CCAGCGGCAA GCTGAACCAG
CAGGTGACGC TGGTAGGCTT CGGTGACGCC AAGAGCGATC CGGCACGCGC GGCCCTGCTG
TCCCGGCTGC GCGCCATGGC CGTGCGCCGC GAGCTGATAA AAAGCGGCGT GACCTTTCGC
GACATCCTTG GCCTGGGCGA CGAAATGCCC GTCGCAACCA ACGACATCGA CGACGGCCGG
ATCAAGAACC GCCGCGTCGA GGTCTGGGTG CAGTAG
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| Protein sequence | MVTLMLRALL TALILSSATL PFAVLAALPT PAGDGPALRI QGSNTINAQL GPALLEGLMR
QQGLQAVQTV AGNVTNEQRV VGTSATGQLV SVEVAAHGSG TGFAALKAGN ADIAASSRPI
KDQEARELSS FGDLKSAVGE QVIAIDGVAV ILHPGNPLRQ LDTLQLARIF SGEIKDWSEL
GGNPGAIHIY ARDEKSGTYE TFKELVLAKY GKNLSATALR FESGEQLSDE VSKDLNGIGF
SGLPSIRRAK AVAIADGDSR PMLPTISLIA TEDYPLSRRL YLYVPPSIHQ RWAQALVRFT
QSAKGQAIVA QSGFVSQTVQ ALKVPPTAQM PADYQALARK AERLSVNFRF AQGSARLDNK
AQQDLKRVAE YLKASGKLNQ QVTLVGFGDA KSDPARAALL SRLRAMAVRR ELIKSGVTFR
DILGLGDEMP VATNDIDDGR IKNRRVEVWV Q
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