Gene PSPTO_2741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2741 
Symbol 
ID1184395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3046279 
End bp3047088 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content58% 
IMG OID637394110 
ProductISPsy4, transposition helper protein 
Protein accessionNP_792547 
Protein GI28869928 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTTC AACATGCTCG CCTGACAGAA CTATGCAAGG GGCTAAAGCT TGAGCGCGTC 
GGGGTGGACT GGCCGCACCT GGCCCAACAA GCAGCAAGCG GCGAAGACAG CTTTGCCGAC
TTCCTCGAAA AGCTGCTGGC TGCCGAGACC GATGCCCGAA GTGAACGCTC TCGACAGGCC
CTGCTGAAAA CTGCCGCGCT GCCCGCTGTG AAAACGCTGG AGCAATACGA CTTCGCGTTT
GCCACCGGCG TCCCCCGGGC ACAGCTCCAG GAGCTGGCAG CACTGAGTTT TGTTGGACGT
GCCGAGAACA TCGTGTTCCT GGGGCCTAGT GGTGTAGGCA AGAGCCACCT GGCTATCGCC
CTGGCCTACC GGGCAGTGAT GGCCGGTATC AAAACCCGCT TCGTCACGGC GGCTGACTTG
ATGCTGCAAC TGACCGCTGC GCACCGCCAG GAACGGCTCA AGGAATACTT CAGTCGTGTG
GTGATGGCCC CTGGGTTGTT GGTCATCGAT GAAATCGGCT ACCTGCCGTT TGGTCGTGAT
GAAGCCAACC TGTTCTTCAA TGTTGTCGCC AAGCGCTACG AGCAAGGCAG CCTGATCCTC
ACGAGTAACT TGCCGTTTAC CCAGTGGGCC GGAACCTTTG CGGATGATCA AACACTGACA
GCGGCCATGC TGGACAGGCT GTTACATCAT GCCCATATCG TGCAGATGAC AGGTGAAAGC
TATCGACTCA AGGACAAGCG CAAAGCAGGA ACCAAATCTT CTCGGGCCGA ACCGGCTCGA
AAATATGAAC CCGAGGGGGG TCAAAACTAA
 
Protein sequence
MNLQHARLTE LCKGLKLERV GVDWPHLAQQ AASGEDSFAD FLEKLLAAET DARSERSRQA 
LLKTAALPAV KTLEQYDFAF ATGVPRAQLQ ELAALSFVGR AENIVFLGPS GVGKSHLAIA
LAYRAVMAGI KTRFVTAADL MLQLTAAHRQ ERLKEYFSRV VMAPGLLVID EIGYLPFGRD
EANLFFNVVA KRYEQGSLIL TSNLPFTQWA GTFADDQTLT AAMLDRLLHH AHIVQMTGES
YRLKDKRKAG TKSSRAEPAR KYEPEGGQN