Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2719 |
Symbol | |
ID | 1184373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3018617 |
End bp | 3019429 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394088 |
Product | enoyl-CoA hydratase/isomerase family protein |
Protein accession | NP_792525 |
Protein GI | 28869906 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.345596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGATT ATCAGAGTTT CCGGTTCGAG CTGGCTGACA GTATTGCTCA CGTACAGATA AACCGGCCTG AAAAGCTCAA TGCCATGAAT GACGCGTTCT GGACCGAAAT CATCGAGATA TTCGACTGGA TCGAGCGCAA CGATGAAGTG CGCGTGGTGG TGCTCAGCGG CGCGGGCAAG CATTTTTCCT CGGGTATCGA TCTGGCCTTG CTGGCGTCGG TCGCCAGCCA GATGGGCAAG GATCCCGGAC GCAACGCGCG GCTGTTGAGG CGCAAGATTC GTGACATGCA GGCGTCGTTC ACTGCCGTGG ACACGTGCCG CAAGCCGGTA CTCGCCGCCA TTCAGGGTTA TTGCCTGGGC GGTGCCATCG ACCTGATCTC GGCCTGCGAC ATGCGTTATG CCGCCGCTGA TGCGCAGTTT GCCATTCGCG AGATCGACAT GGGCATGGCT GCCGATGTAG GGACATTGCA ACGGTTGCCG AGGATCATCG GCGACGGTGT GCTGCGTGAA CTGGCGTACA CCGGGCGCAC CGTCGGTGCC GAGGAAGCGC AGCGCATTGG CCTGGTCAAT CGCACCTTCG ATGACACCGA AGGTCTCTTG CAGGGCGTAT TTGCGGTGGC GCGGGAGATA GCCGAAAAAT CCCCGCTGGC CATCGAAGGC ACCAAGCAAA TGATCAGCTA TATGCGTGAC CACAGGGTCG AAGACGGCCT TGAACACGTT GCCATCTGGA ACGCAGCCAT GCTGCAATCA CCTGACCTGA AACTGGCAAT GGTTGCGCAG ATGAGCAAGC ACAAGCCGGT CTTTGATAAT TGA
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Protein sequence | MSDYQSFRFE LADSIAHVQI NRPEKLNAMN DAFWTEIIEI FDWIERNDEV RVVVLSGAGK HFSSGIDLAL LASVASQMGK DPGRNARLLR RKIRDMQASF TAVDTCRKPV LAAIQGYCLG GAIDLISACD MRYAAADAQF AIREIDMGMA ADVGTLQRLP RIIGDGVLRE LAYTGRTVGA EEAQRIGLVN RTFDDTEGLL QGVFAVAREI AEKSPLAIEG TKQMISYMRD HRVEDGLEHV AIWNAAMLQS PDLKLAMVAQ MSKHKPVFDN
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