Gene PSPTO_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2719 
Symbol 
ID1184373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3018617 
End bp3019429 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content58% 
IMG OID637394088 
Productenoyl-CoA hydratase/isomerase family protein 
Protein accessionNP_792525 
Protein GI28869906 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.345596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGATT ATCAGAGTTT CCGGTTCGAG CTGGCTGACA GTATTGCTCA CGTACAGATA 
AACCGGCCTG AAAAGCTCAA TGCCATGAAT GACGCGTTCT GGACCGAAAT CATCGAGATA
TTCGACTGGA TCGAGCGCAA CGATGAAGTG CGCGTGGTGG TGCTCAGCGG CGCGGGCAAG
CATTTTTCCT CGGGTATCGA TCTGGCCTTG CTGGCGTCGG TCGCCAGCCA GATGGGCAAG
GATCCCGGAC GCAACGCGCG GCTGTTGAGG CGCAAGATTC GTGACATGCA GGCGTCGTTC
ACTGCCGTGG ACACGTGCCG CAAGCCGGTA CTCGCCGCCA TTCAGGGTTA TTGCCTGGGC
GGTGCCATCG ACCTGATCTC GGCCTGCGAC ATGCGTTATG CCGCCGCTGA TGCGCAGTTT
GCCATTCGCG AGATCGACAT GGGCATGGCT GCCGATGTAG GGACATTGCA ACGGTTGCCG
AGGATCATCG GCGACGGTGT GCTGCGTGAA CTGGCGTACA CCGGGCGCAC CGTCGGTGCC
GAGGAAGCGC AGCGCATTGG CCTGGTCAAT CGCACCTTCG ATGACACCGA AGGTCTCTTG
CAGGGCGTAT TTGCGGTGGC GCGGGAGATA GCCGAAAAAT CCCCGCTGGC CATCGAAGGC
ACCAAGCAAA TGATCAGCTA TATGCGTGAC CACAGGGTCG AAGACGGCCT TGAACACGTT
GCCATCTGGA ACGCAGCCAT GCTGCAATCA CCTGACCTGA AACTGGCAAT GGTTGCGCAG
ATGAGCAAGC ACAAGCCGGT CTTTGATAAT TGA
 
Protein sequence
MSDYQSFRFE LADSIAHVQI NRPEKLNAMN DAFWTEIIEI FDWIERNDEV RVVVLSGAGK 
HFSSGIDLAL LASVASQMGK DPGRNARLLR RKIRDMQASF TAVDTCRKPV LAAIQGYCLG
GAIDLISACD MRYAAADAQF AIREIDMGMA ADVGTLQRLP RIIGDGVLRE LAYTGRTVGA
EEAQRIGLVN RTFDDTEGLL QGVFAVAREI AEKSPLAIEG TKQMISYMRD HRVEDGLEHV
AIWNAAMLQS PDLKLAMVAQ MSKHKPVFDN