| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2717 |
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| Symbol | |
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| ID | 1184371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3014885 |
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| End bp | 3016915 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394086 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | NP_792523 |
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| Protein GI | 28869904 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.230475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCTA ACGGATTACT GTCGGAACGC GCGATCATTC TGGCCCCCAG AGGCCGCGAC
AGTCAGATTG CCCTGCGCAT TTTGAACGAA GCCGGCTACC CGGCGACGGC GGCGGCTGAC
CTGTTCGAGC TGGTCAAAGA GCTGACCGCC GGGGCCGGTT TGGCGATTAT TGCCGACGAA
GCGCTGCGCA ACGGCGATAT CAGCCCGTTG CTGGCGCTGC TCGGCCAGCA GCCCGCCTGG
TCCGACCTGC CGATTGTCTT GCTGACCCAT CACGGCGGCC CTGATCACAA CCCGTCTGCG
CGGCTGGGCA ACATGCTGGG CAACGTGACC TTTCTGGAGC GCCCTTTTCA TCCGGTGACG
CTGGTCAGCC TGGTGACCAC AGCGGTACGT GGCAGACGGC GCCAGTACGA AGCCCGCGCA
CGCATGGAAG ACCTGCACGA AAGCGAGGGA CGCCTGCAAA ACGCGCTGAA AGCCGGCAGG
CTGGGGTCAT GGGTGCTCGA AGCAGAACAT CTGCGGCTGA CTTCCTCGAC CATCACCAAA
GCTCACTACG GTCGCGACGA TGGGGACAGT TTTGATTATC GCGACTGGCT TGCCGCCGTT
TATTCTGAAG ACCAGCCGCG AATGCAGTCT GCGCTCCAGC GCAGCCTGGA TACCGGCGTC
GATTTCATCA TCGAATACCG CAACGTCTGG CCTGATGGCT CGCTCAGTTG GGTCGATGTG
CGCGCTCGTG CCATCCGCGG CAAGAACGGC ATGGTCAGTT CCCTGGCAGG CGTGACCTCG
GACATCACCG AGCGCAAGCA GGCTGAATCG CAATTACGAC GCCTCAACGA AACGCTGGAA
CATCAGGTCG AAGAGCGCAC CTCTCAATTG CGGCAAAAGG AAGAGATTCT CCGCCAGTCG
CAGAAAATGG AAGCCGTCGG CCAGTTGACC GGCGGGATTG CCCATGACTT CAACAATATG
CTGACCGGCA TCATCGGCAG CCTGGAATTG ATACGAAGGC GGGTATCACG AGGCCATACC
GAAGACCTGA ACAGCCTGGT CGACCTCGGT GTGACATCGG CGAACCGTGC CGCAGCCCTG
ACTCATCGCC TGCTGGCTTT TTCACGGCGC CAGTCGCTGG ACTCCAAGCC GGTCGAAATA
AACCACCTGG TCGACGCGAT GGACGAACTT CTCCAGCGCA GCGTCAACGA GAGCATTCAC
TTGCAGCTGC GTCTTGCCGG TGATCTGTGG ACCGCTGAAG CCGACCCCAA CCAGCTGGAA
AACGCCCTGC TCAACCTGGT GCTCAACGCC CGCGATGCCA TGCCTGACGG CGGCACGCTG
GTGGTCGAGA CCTCCAATCA GCAACTGGAC ACATCCTTCA CCAACGCCCA CGAAAACCTG
CTGCCGGGTG ACTACGTGGT GCTGAGCGTC AGTGACAATG GCTGCGGCAT GCCAGAGACG
GTCATCAGTC GGGCCTTCGA TCCGTTCTTT ACCACCAAGC CCATTGGTCA GGGCACCGGC
CTGGGCCTAT CGATGATCTA TGGCTTCAGC AAGCAGTCGC ATGGTCACGT TTCGATCAAG
AGCGAAGTCG GTCTGGGCAC TACCGTGCAG CTGTTTCTGC CACGCTTTCA GGGGCTCAAG
GAAGAAGCCG AGCCAACCTT GCAGAGCAGT GCACTGTATG CCGAGAACGG CGAAACGGTG
CTGATCGTCG AAGACGACCC TGCTGTTCGG GCGCTGGTCA GTGAAGTGCT CAGCGAGCTG
GGGTATGCGT TTATCGAGGC CAGCCAGGCG ACAGATGCAG TGCCGATACT GGAATCCGCT
CAGCGTATCG ACCTGCTGAT CAGCGATGTC GGGCTACCGG GCATGAACGG CCGGCAACTG
GCAGAAATCG CCCGGCAACT GCGCCCCGCA CTCAAGGTGC TGTTCATTAC CGGCTATGCA
GAACACGCCG CCGTGCGCGC AGGCTTTCTG GACACGGGCA TGGAACTGAT CACCAAACCC
TTCGCCTTCG ACCACCTGAC CTCGAAAGTG CGGCAAATGA TCGAAGCCTG A
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| Protein sequence | MSANGLLSER AIILAPRGRD SQIALRILNE AGYPATAAAD LFELVKELTA GAGLAIIADE
ALRNGDISPL LALLGQQPAW SDLPIVLLTH HGGPDHNPSA RLGNMLGNVT FLERPFHPVT
LVSLVTTAVR GRRRQYEARA RMEDLHESEG RLQNALKAGR LGSWVLEAEH LRLTSSTITK
AHYGRDDGDS FDYRDWLAAV YSEDQPRMQS ALQRSLDTGV DFIIEYRNVW PDGSLSWVDV
RARAIRGKNG MVSSLAGVTS DITERKQAES QLRRLNETLE HQVEERTSQL RQKEEILRQS
QKMEAVGQLT GGIAHDFNNM LTGIIGSLEL IRRRVSRGHT EDLNSLVDLG VTSANRAAAL
THRLLAFSRR QSLDSKPVEI NHLVDAMDEL LQRSVNESIH LQLRLAGDLW TAEADPNQLE
NALLNLVLNA RDAMPDGGTL VVETSNQQLD TSFTNAHENL LPGDYVVLSV SDNGCGMPET
VISRAFDPFF TTKPIGQGTG LGLSMIYGFS KQSHGHVSIK SEVGLGTTVQ LFLPRFQGLK
EEAEPTLQSS ALYAENGETV LIVEDDPAVR ALVSEVLSEL GYAFIEASQA TDAVPILESA
QRIDLLISDV GLPGMNGRQL AEIARQLRPA LKVLFITGYA EHAAVRAGFL DTGMELITKP
FAFDHLTSKV RQMIEA
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