| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2712 |
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| Symbol | |
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| ID | 1184366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3008195 |
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| End bp | 3011707 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394081 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | NP_792518 |
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| Protein GI | 28869899 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.340753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGGA CGCCTTCCGT CGATGAGCAG CGCTTTCGAA AATTGCTGGG GCGCAATGTC
GGGTTGCCGC TGGGTGTCGG CGTACTGAGC GCAGTTTTTT TCATTCTGCT GATCAGTTAT
CTGCTTAACG CCATTCAGTG GGTTGAACAT ACGGACCGCG TGATCAACAA CACCAACCGC
TCGATGAAGC TGTCGATTGA CATGGAAACC GGCATGCGCG GCTTCCTGCT CACAGGCGAT
CAGCATTTTC TCGATCCCTA TGAAATCGCC AAGCCGTTGC TGGTTGCCGA ACTCAACGGC
CTCCAGGACC TGGTAAAGGA CAACCCGACG CAACAGGACC GGTTCAGGCG CTTGTTCACC
ATGCAGCAGG AGTGGAACGT CTTTGCTCAG GACATGATCG ACCTGCGGCG CAACAACGGC
GACTTTCAGA CGCCGGTGCT GGCCGGACGT GGCAAGCGCA TTACCGATCA GATTCGCACC
GAGTACGAAC AGGCTGTCGA GATGGAGCAG CAACTTCGCC TGACCCGCAA TGCCGAGGTC
ACGCGCAGCA CGGTCATTTC CGTCACGCTG TACCTGATAT TTGTGGTGAT CGTCAGCGGC
ATTCTGGCGT ACATAGGACG CAGGGATCTG CTGTCTCTTT CGGCCACCTA CAGCGCAAAT
CTGAGGCAGC AGGAAGTCAA TGCCGAGCGT CTGCAGAAAG TGGCATGGCT GCGCAACGGC
CAGAGCGAGC TGGCCGAACA GGTGCTCGGG CAACTGACGC TGAACATGCT GGGCCGCAAT
ATTCTGCAAT TTCTGACGCA ATACCTCGGC GCTTCGGTGG CGGCGATGTA CATCCGTCAG
GACCACGGCG GCTTGACGCG TGCGGCTTCC TACGGGTTTT CCCGCGAGCA GGAGCAACAG
GATCAGACCA TTCACAGCGA TGAAGGCGTG GTGGGACAGG CCGCATCGCA GGACCGGATC
ATTACGCTGG ACGAGCTGCC GGAGAATTAT TTCAAGGTGG CTTCCGGGTT GGGCGAGGGT
TCACCGCGCA GTGTGGTGGT GGTGCCTATC AGCAATGACG ATCAGGTCAA CGGCGTGGTT
GAACTGGGTT TTCTGCGCCC TCTGACCGAG CAGGACGTCG AGTTTCTTGA ACTGGTGTCG
GATAACATCG GTACGTCCAT CGAAGCGGCT CGCTATCGCC AGCGTCTGCA GGAAGTCCTG
GCCGAGACTC AACAGCTCAA CGAAGAGTTG CAGGTGCAGC AGGAAGAACT GCGCACGGCC
AACGAAGAGC TGGAAGAGCA GTCGCGCATT CTCAAGGAGT CCCAGGCGCA CCTGGAGACC
CAGCAGGCCG AGCTGGAACA GACCAACGAG CAACTCGCCG AGCAAAGTCA GGCGCTGGCC
GATCAGCGCG ATGCGCTGGA CCGCAACAAT GAAGAGCTGA ATATTGCCCA AGGCGAGTTG
CAGGCCCGTG CCGACGAGTT GCAACGTGCC AGCAAGTACA AGTCCGAGTT CCTTGCCAAC
ATGTCCCACG AGCTGCGCAC GCCGCTCAAC AGTTCGTTGA TCCTTGCCAA GTTGCTGGCC
GAGAACCCGA GCGAAAACCT CACCGCCGAG CAGGTCAAGT TTGCTGAATC GATCTATTCG
GCGGGCAATG ACCTGCTCAA CCTGATCAAC GACATTCTGG ACATTTCCAA GGTCGAAGCC
GGCAAACTTG AAGTGCGCCC GGAAAACAGC AGCGTGTCAC GCTTGGTCGA GGGCTTGCGT
GGCTTGTTCC AGCCGCTGGC CGCGGAGAAG AAGCTGGCGT TCACGGTCGA CATCCAGGCC
GGCGCGCCGA CCATGCTGTT CACCGATCGC CAGCGTCTGG AGCAGATCCT CAAGAACCTG
CTGTCCAACG CGATCAAATT CACCGAAGCG GGCGCGGTCA GCATGGTGGT TTCGCGCCAG
CCGGGCGCTG GCATCGTGTT CAGTGTGCGC GATTCGGGCA TCGGCATTGC CGAGGAGCAT
CAGCAAGGTA TTTTCGAGGC GTTCCGTCAG GCGGATGGCA CCACCAACCG GCGTTATGGC
GGTACGGGGC TGGGCCTGTC GATTTCCCGC GATCTGGCCG CGCTGCTGGG CGGATCGATC
AGTGTTACCA GTGCTCCGGG GCAGGGCAGT ATCTTTACCC TGGTGCTGCC GGAGCAGTAT
GTCGAGCAGG ACCCTCAGGC GCCGGGCAGC GAGCCTTTGG TCATGCACAC GCCTGCCGTG
TTGCAACTGT CGGTTCCCGC GGCGCCGGTC ATCCAGCCGC CGCTGCCAGC GCCTGTCGAG
ACGCCTATCG CCGTATTTGC CGATGACCGT GACAAGGCGC CGTTCGAGCG GCGCTGCATT
CTGGTGATCG AGGACGAAGT GCGGTTCGCC CAGATCCTCT TCGATCTGGC CCATGAACTG
GGTTACGACT GTCTGGTGGC GCATGCCGCC GATGACGGTT TCAACCTGGC GTCGCGCTAC
ACGCCGGACG CGATTCTACT GGACATGCGC CTGCCGGATC ACTCGGGCCT GACCGTGCTG
CAGCGCCTCA AGGAGCTCGC CCCCACGCGG CATATTCCGG TGCATGTGAT TTCCGTCGAG
GACCGTCAGG AAGCGGCATT GCACATGGGC GCCATCGGCT ATGCGGTCAA GCCGACAACC
CGCGAAGAGC TCAAGGATGT ATTTGCCAAG CTGGAGGCCA AGCTGACCCA GAAGGTCAAG
CGCATCCTGC TGGTCGAAGA CGACGACCTG CAACGTGACA GTATTGCGCG GCTGATCGGC
GACGATGACA TCGAAATCAC CGCCGTAGGT TTCGCGCAAC AGGCGCTGGA CCTGCTGCGC
GACCACATTT ATGACTGCAT GATCATCGAC CTGAAACTGC CGGACATGCT CGGCAACGAG
CTGCTCAAGC GCATGTCCAC CGAAGATATC TGCGCCTTTC CACCGGTAAT CGTTTATACC
GGGCGCAACA TGACCCGCGA TGAAGAAGCC GAGCTGATGA AATATTCGCG CTCTATCATC
ATCAAGGGCG CGCGCTCCCC GGAACGCCTG CTCGACGAGG TCACGCTGTT CCTGCATAAG
GTCGAGTCGC AGCTGTCCAG CGAGCGGCAG AAAATGCTCA AGACCGCGCG CAGCCGCGAC
AAGGTCTTCG AGGCGCGCAA GATTCTGGTG GTCGATGACG ACGTGCGCAA CATCTTTGCC
CTGACCAGCG CGCTGGAGCA CAAGGGCGCC GTGGTGGAAA TCGCCCGTAA TGGCCTGGAG
GCGATTGCCA AACTCAATGA AGTCGAGGAC ATCGATCTGG TGCTGATGGA CGTGATGATG
CCCGAAATGG ACGGCTACGA AGCCACCATC GAGATTCGCA AGGACCCACG CTGGCGCAAG
CTGCCGATCA TCGCCGTGAC CGCCAAGGCC ATGAAGGACG ATCAGGAGCG CTGCCTGCAG
GCCGGTTCCA ACGACTACCT GGCCAAGCCT ATCGATCTGG ACAGGCTGTT TTCGCTGATT
CGCGTCTGGC TGCCGAAAAT GGAGCGCATT TGA
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| Protein sequence | MNRTPSVDEQ RFRKLLGRNV GLPLGVGVLS AVFFILLISY LLNAIQWVEH TDRVINNTNR
SMKLSIDMET GMRGFLLTGD QHFLDPYEIA KPLLVAELNG LQDLVKDNPT QQDRFRRLFT
MQQEWNVFAQ DMIDLRRNNG DFQTPVLAGR GKRITDQIRT EYEQAVEMEQ QLRLTRNAEV
TRSTVISVTL YLIFVVIVSG ILAYIGRRDL LSLSATYSAN LRQQEVNAER LQKVAWLRNG
QSELAEQVLG QLTLNMLGRN ILQFLTQYLG ASVAAMYIRQ DHGGLTRAAS YGFSREQEQQ
DQTIHSDEGV VGQAASQDRI ITLDELPENY FKVASGLGEG SPRSVVVVPI SNDDQVNGVV
ELGFLRPLTE QDVEFLELVS DNIGTSIEAA RYRQRLQEVL AETQQLNEEL QVQQEELRTA
NEELEEQSRI LKESQAHLET QQAELEQTNE QLAEQSQALA DQRDALDRNN EELNIAQGEL
QARADELQRA SKYKSEFLAN MSHELRTPLN SSLILAKLLA ENPSENLTAE QVKFAESIYS
AGNDLLNLIN DILDISKVEA GKLEVRPENS SVSRLVEGLR GLFQPLAAEK KLAFTVDIQA
GAPTMLFTDR QRLEQILKNL LSNAIKFTEA GAVSMVVSRQ PGAGIVFSVR DSGIGIAEEH
QQGIFEAFRQ ADGTTNRRYG GTGLGLSISR DLAALLGGSI SVTSAPGQGS IFTLVLPEQY
VEQDPQAPGS EPLVMHTPAV LQLSVPAAPV IQPPLPAPVE TPIAVFADDR DKAPFERRCI
LVIEDEVRFA QILFDLAHEL GYDCLVAHAA DDGFNLASRY TPDAILLDMR LPDHSGLTVL
QRLKELAPTR HIPVHVISVE DRQEAALHMG AIGYAVKPTT REELKDVFAK LEAKLTQKVK
RILLVEDDDL QRDSIARLIG DDDIEITAVG FAQQALDLLR DHIYDCMIID LKLPDMLGNE
LLKRMSTEDI CAFPPVIVYT GRNMTRDEEA ELMKYSRSII IKGARSPERL LDEVTLFLHK
VESQLSSERQ KMLKTARSRD KVFEARKILV VDDDVRNIFA LTSALEHKGA VVEIARNGLE
AIAKLNEVED IDLVLMDVMM PEMDGYEATI EIRKDPRWRK LPIIAVTAKA MKDDQERCLQ
AGSNDYLAKP IDLDRLFSLI RVWLPKMERI
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