| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2687 |
|---|
| Symbol | |
|---|
| ID | 1184339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 2981249 |
|---|
| End bp | 2981812 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637394055 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_792494 |
|---|
| Protein GI | 28869875 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCTGCG CCGGGTGGGT CTATAATCGC GTCTTTCTCA CATCAGGATA TGTCATGTCT
ATCTCCCTGT ACGCCGCTTC CGTTCCTGTC TTCCAGCAAA TGCTCAATGC GCTGAGCGAC
GTTCTGACCA AGGCCGAAGC CTACGCGACC GAGAAGAAAA TCCAGCCGCC CGCTCTGTTG
CAGGCGCGCC TGTTCCCGGA CATGCTGCCG TTCACTCGTC AGGTCCAGAT TGCCGTCGAT
TTCGCCAAGG GTGCTTCGGC CCGTCTGGCA GGCGTCGAGA TCCCGCAATA CGACGACACG
GAAACCACCT TCGCCGAATT GCAGGCACTG CTGGCCAAGA CGCTCGCGTT CATCGGCAGC
ATCACGCCCG AGCAAGTCGA CGGCAAGGAA AGCATCGAAA TCGTTCTGCG CCCTGGTACT
GAAAAGGAAA AACGCCTGAA CGGTCAGGCT TACCTGCTCA GCTATGCCTT GCCGCAGTTC
TTCTTCCATG TCACCACGGC CTACGACCTG CTGCGCCACA ACGGCGTCGA AATCGGCAAA
CGTGACTTCA TGGGCAAGTT CTAA
|
|---|
| Protein sequence | MFCAGWVYNR VFLTSGYVMS ISLYAASVPV FQQMLNALSD VLTKAEAYAT EKKIQPPALL
QARLFPDMLP FTRQVQIAVD FAKGASARLA GVEIPQYDDT ETTFAELQAL LAKTLAFIGS
ITPEQVDGKE SIEIVLRPGT EKEKRLNGQA YLLSYALPQF FFHVTTAYDL LRHNGVEIGK
RDFMGKF
|
|---|
| |