| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2685 |
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| Symbol | |
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| ID | 1184337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2979641 |
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| End bp | 2980417 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394053 |
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| Product | shikimate 5-dehydrogenase, putative |
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| Protein accession | NP_792492 |
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| Protein GI | 28869873 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTTA TCGCCAACAG GGATACGCAG CTGTGTATGT CGATGGCCGC ACGTCCCGGA
AACTTCGGCG TACGTTTTCA TAATCACCTT TTTCAGCAGT TGGACCTCAA CTTCTATTAC
AAAACATTTT CGCCCAATGA CCTGACGGCA GCTGTTGCCG GTATACGCTC ACTGGGAATA
CGCGGCAGCG CGGTGTCGAT GCCGTTCAAA GAAGCCTGCA TCGAGCTGGT CGACGAGCTG
GACGTATCAG CGGCCGCGAT CCAGTCGATC AATACCATCG TCAATACCGA CGGGCACTTG
AAGGCGTTCA ACACGGACTA CATTGCCGTG GCGCAACTGA TGGAAAGCCA TGCCGTGCCA
CACAGCGCAT TTGCCCTGCG CGGCAGCGGC GGAATGGCCA AAGCGGTGGC GTTTGCCCTG
CGCGATGCAG GTTTCACCGA CGGGTTGATC GTGGCGCGTA ACCAGCAGGC CGGGCAGCGC
CTGGCAGAGG CGTGTGGTTT TCGCTGGCAG GCTGACCTGG GAAGCGCGCG CCCACCGTTG
CTGGTCAATG TCACGCCGCT GGGTATGCAA GGCCCGCAGG GCGATGAACT GGCGTTTGAT
ATGCAGGCAA TCGAAGCCGC TGACACGATT TTCGATGTGG TCGCCACGCC CGCCGATACA
CCGTTGATTC AGGCTGCACG TCGTCTGGGC AAGCGGCTCG TGAGCGGCGA TGAGGTGGCC
GCTATCCAGG CGCTTGAGCA GTTCGTGCTG TACACCGGCC ATTCGCCCGA CCGATGA
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| Protein sequence | MPVIANRDTQ LCMSMAARPG NFGVRFHNHL FQQLDLNFYY KTFSPNDLTA AVAGIRSLGI
RGSAVSMPFK EACIELVDEL DVSAAAIQSI NTIVNTDGHL KAFNTDYIAV AQLMESHAVP
HSAFALRGSG GMAKAVAFAL RDAGFTDGLI VARNQQAGQR LAEACGFRWQ ADLGSARPPL
LVNVTPLGMQ GPQGDELAFD MQAIEAADTI FDVVATPADT PLIQAARRLG KRLVSGDEVA
AIQALEQFVL YTGHSPDR
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