| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2680 |
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| Symbol | gabD-3 |
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| ID | 1184332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2975356 |
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| End bp | 2976786 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394048 |
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| Product | succinate-semialdehyde dehydrogenase |
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| Protein accession | NP_792487 |
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| Protein GI | 28869868 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCCAG ACGTACAGCT TTATATCGAT GGCCAATGGC GCGCGAGCCG CGATGGTCGC
TCCATTCCTG TTATAGACCC TGCTACCGGC CAGTCGCTGG GCAGCGTGGC GCATGCCGGT
ATCGCCGATC TTGATGAAGC ACTCTCAGCA GCGGAGCGTG GCTTTGCCAC CTGGCGCGCG
ACCTCGGCGT ATGACCGTTA CAAGCTGATG CAGAAAGCCG CCGATCTGGT TCGTGAGCGG
GCGGACAGCA TCGCCAGAAT CATGACTCAG GAACAAGGCA AGCCGCTGGC TGAGGCGCGC
ATGGAAACCC TGTCGGCTGC TGACGTCATC GACTGGCTGG CTGAAGAGGG CCGTCGCAGC
TATGGCCGTA TCGTGCCGTC GCGTGGCGTG TCCATCGAGC AGAAGGTTAT CAAGGAGCCC
GTCGGCCCGG TTGCTGCGTT CACACCGTGG AACTTCCCGA TCAATCAGGT GGTGCGCAAG
CTGTCTTCGG CGCTGGCAGC CGGTTGCTCG ATCATCGTCA AAGCCCCGGA AGAAACTCCG
GGGTCACCTG CCGAGCTGAT TCGGGCGTTT GCCGATGCGG GCGTTCCGGC AGGCGTCATT
GGTTTGGTGT ATGGCGATCC GGCGGAAATT TCCGGCTACC TGATTCCGCA CCCGGTTATT
CGCAAAGTGA CTTTTACCGG CTCTACGCCG GTCGGCAAAC AACTCGCGGC ATTGGCCGGC
AAGCACATGA AGCGCGCCAC CATGGAGCTG GGCGGGCATG CGCCAGCACT GGTGTTCGAC
GACGCCGACA TTGACCTGGC GGCTCGCGTG CTGGCCACCG CCAAGTTCCG CAACGCCGGG
CAGGTCTGCG TATCGCCGAC GCGTATTCTG GTGCAGCGCA AGGTGTTGCA GGCGTTTACC
GAGAAATTCG TCGGCCTGAC CCGTGAGATC AAAGTGGGCA ACGGTCTGGA GTCGGGTACG
ACCATGGGCC CGGTGGCCAA TGATCGACGT ATCCCGGCGC TGGTTGATCT GATTGAAGAC
GCAGTCAGTG CTGGCGCGAC CGTTTCTGCA GGTGGCAAGG CTGTCGAGGG ACAGGGCTAC
TTCTTCGAGC CGACCGTACT CAGTGGCCTG ACGCCAGCCA TGCGCATCAT GAACGAAGAA
CCGTTCGGGC CGGTTGCGCT ACTGGTGCCG TTCGACACCG TGGAAGAAGC CATTGTCGAG
TCCAACCGGG TGCCGTTCGG GCTGGCGTCC TACGCCTTCA CGACCTCGAT GAAGACCGCT
CAGGCGCTGA GCACCTACAT CGAAGCGGGC ATGCTGTCGA TCAACCACCA GGGCATCGGC
TTGCCGGAAG TGCCGTTCGG CGGGATCAAG GATTCCGGCT ACGGTTCCGA AGGCGGCACC
GAGGCCATCG AGGCCTACCT GAACACCAAA CTGGTCACTC AATACAGCTG A
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| Protein sequence | MYPDVQLYID GQWRASRDGR SIPVIDPATG QSLGSVAHAG IADLDEALSA AERGFATWRA
TSAYDRYKLM QKAADLVRER ADSIARIMTQ EQGKPLAEAR METLSAADVI DWLAEEGRRS
YGRIVPSRGV SIEQKVIKEP VGPVAAFTPW NFPINQVVRK LSSALAAGCS IIVKAPEETP
GSPAELIRAF ADAGVPAGVI GLVYGDPAEI SGYLIPHPVI RKVTFTGSTP VGKQLAALAG
KHMKRATMEL GGHAPALVFD DADIDLAARV LATAKFRNAG QVCVSPTRIL VQRKVLQAFT
EKFVGLTREI KVGNGLESGT TMGPVANDRR IPALVDLIED AVSAGATVSA GGKAVEGQGY
FFEPTVLSGL TPAMRIMNEE PFGPVALLVP FDTVEEAIVE SNRVPFGLAS YAFTTSMKTA
QALSTYIEAG MLSINHQGIG LPEVPFGGIK DSGYGSEGGT EAIEAYLNTK LVTQYS
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