Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2670 |
Symbol | |
ID | 1184322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2966404 |
End bp | 2966967 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394038 |
Product | mutT/nudix family protein |
Protein accession | NP_792477 |
Protein GI | 28869858 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0148269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGACAC CGCGCTTCTG TCCTCAATGC GGTAGCGCTG ACCTGGCTCA GCGCATCCCC GGCGGCGACA CCCATGCGCG GCTGATATGC GGAAGTTGCC AGTACATTCA TTACGTCAAC CCGAAGATCA TTGCCGGCTG CATCATCGAA CAGGAAGGCA AGTACCTGCT CTGCCAGCGC GCCATACCGC CGCGCCCCGG CACCTGGACA CTGCCAGCCG GCTTTATGGA AAGTGGCGAA ACCACCGAGC AGGCGGCGCT GCGTGAAGTC TGGGAAGAAA GCGGCGTGCG CGCCGAAATC GTCTCGCCCT ACTCCATCTT CAGCGTGCCG CGCATCAGCG AGGTGTACAT CGTGTTCCGC GCCATCGCGC TGGAAGTCAC TGGTCAGTTC GGCCCGGAAA CCCTGGACTA CAAATTCTTC GCCCCCGAAG ACATCCCCTG GGACAGCATC TACTACCCCG CCATCCGCCA GATTCTTGAG CGCTACATTG AAGAACGCCA TGCCGGTGTG TACGGCATCT ATATCGGCAA CGACGACACC GGCAAGGTCC ACTTTATTCG TTAA
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Protein sequence | MVTPRFCPQC GSADLAQRIP GGDTHARLIC GSCQYIHYVN PKIIAGCIIE QEGKYLLCQR AIPPRPGTWT LPAGFMESGE TTEQAALREV WEESGVRAEI VSPYSIFSVP RISEVYIVFR AIALEVTGQF GPETLDYKFF APEDIPWDSI YYPAIRQILE RYIEERHAGV YGIYIGNDDT GKVHFIR
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