| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2666 |
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| Symbol | |
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| ID | 1184318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2962554 |
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| End bp | 2963408 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394034 |
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| Product | spermidine/putrescine ABC transporter, permease protein, putative |
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| Protein accession | NP_792473 |
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| Protein GI | 28869854 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0393724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCAT CCCCTTCCCT TGCGCAGCGC TGGCGTGGCA GCCGCAACCT GCTGCCGGCG
CTGATCTTTC TGGGCCTGTT TTTCTTCGCT CCGCTGATCG GCCTGTTGCT GCGCGGGGTA
CTTGAACCGG TGCCCGGCCT TGGCAACTAC GAGCAACTGT TCGCCAACTC GGCCTATTCC
AGGGTCTTGC TGAACACCTT CTCGGTTGCC GGGCTGGTCA CGCTGTTCAG CCTGCTGCTG
GGCTTTCCGC TGGCCTGGGT CATCACGCTG GTGCCACGCG GCTGGGGCCG CTGGATTCTG
AATATTGTGC TGCTGTCGAT GTGGACCAGC CTGCTGGCGC GCACCTACTC TTGGCTTGTG
CTATTGCAAG CGTCCGGGGT CATCAACAAG GCGCTGATGG GCATGGGCAT CATCGATCAA
CCGCTGGAAA TGGTCCACAA CCTGACCGGT GTGGTGATCG GCATGAGCTA CATCATGATT
CCGTTCATCG TCCTGCCATT GCAGGCGACC ATGCAGGCCA TCGATCCGAT GGTGCTGCAG
GCGGGTTCGA TCTGCGGGGC CAGCCCGTGG ACCAATTTCT TCCGGGTGTT TTTGCCGCTG
TGCCGTCCGG GGCTTTTTTC CGGGGGACTG ATGGTATTTG TCATGTCGCT CGGTTATTAC
GTCACCCCGG CGTTGCTGGG TGGCGCGCAG AACATGATGC TGCCCGAATT CATCGTCCAG
CAGGTGCAGT CGTTCCTCAA CTGGGGGCTG GCCAGTGCCG CCGCCGCGTT GCTGGTGCTG
ATCACGCTGG TGCTGTTCTA CTTCTACCTG AAGCTCCAGC CGGAATCTCC GGTCGGCGCC
AGCAACGCGA GGTAA
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| Protein sequence | MQPSPSLAQR WRGSRNLLPA LIFLGLFFFA PLIGLLLRGV LEPVPGLGNY EQLFANSAYS
RVLLNTFSVA GLVTLFSLLL GFPLAWVITL VPRGWGRWIL NIVLLSMWTS LLARTYSWLV
LLQASGVINK ALMGMGIIDQ PLEMVHNLTG VVIGMSYIMI PFIVLPLQAT MQAIDPMVLQ
AGSICGASPW TNFFRVFLPL CRPGLFSGGL MVFVMSLGYY VTPALLGGAQ NMMLPEFIVQ
QVQSFLNWGL ASAAAALLVL ITLVLFYFYL KLQPESPVGA SNAR
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