| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2654 |
|---|
| Symbol | |
|---|
| ID | 1184306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 2949573 |
|---|
| End bp | 2950250 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637394022 |
|---|
| Product | 4Fe-4S binding domain protein |
|---|
| Protein accession | NP_792461 |
|---|
| Protein GI | 28869842 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0493248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC CCAAGAAGCA CAAGGACGCT GCTGTGGACG ACCGTGCCGT GCAGCCATCG
CGCCGAAATT TTCTCAAGTT TGGCGCTTCA GGCATTGCTG CAGCCACGCT TTCCACCTGG
ATACCTTCCG ACGGCATGCT TCAGGCAGCG CCCGTTGCAC CGGTGCTGCC GGTTGTGGAA
GACCGCGACG CACCCGCCGC CGGAGAGCAC CGTATTCAGC TGAAGGTCAA CGGCCAGGTG
CATACCCTGA ACGTTCCGGC CAATGCAGTA CTGCTCGATG TACTGCGTGA CCGCCTGCAA
CTGACCGGCA CCAAGAAAGG CTGCGATCAC GGCCAGTGCG GTGCCTGCAC GTTGCTGGTC
AACGGCGTGG CGATCAACTC GTGCCTGTCC ATCGCGGTGC AGCATCAGGG CGACAGCATT
ACCACCATCG AAGGTCTGGC CGAGAACGGC AAGCTGCATC CGGTTCAGGA AGCCTTCTGG
GAACACGATG CTTACCAGTG CGGCTACTGC ACTTCGGGGC AGATCATGAG CGCAGTCGCG
ATTCTCAAGG ATCCCAATCT TGGGTCCGAT GATGCCAGCG TGAGGGAGGC CATGAGCGGC
AACATCTGCC GCTGCGGTGC CTACAAGAAT ATTCTGTCGG CCGTGCAGTC GGCGCGCTCG
AAGATGGGAG CAGTCTGA
|
|---|
| Protein sequence | MSEPKKHKDA AVDDRAVQPS RRNFLKFGAS GIAAATLSTW IPSDGMLQAA PVAPVLPVVE
DRDAPAAGEH RIQLKVNGQV HTLNVPANAV LLDVLRDRLQ LTGTKKGCDH GQCGACTLLV
NGVAINSCLS IAVQHQGDSI TTIEGLAENG KLHPVQEAFW EHDAYQCGYC TSGQIMSAVA
ILKDPNLGSD DASVREAMSG NICRCGAYKN ILSAVQSARS KMGAV
|
|---|
| |