| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2651 |
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| Symbol | |
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| ID | 1184303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2943337 |
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| End bp | 2943714 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394020 |
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| Product | response regulator |
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| Protein accession | NP_792459 |
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| Protein GI | 28869840 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00566392 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTCAA ATGCAGACAA CCAGCGCCCG GCCCAACGGG TGTTGCTGGT GGAAGACGAG
ACGATGCTCG CGATGCTGAT GGAAATGATG CTCGAAGACC TGGGTTTCGC TACGGCCTAT
CACGCCAGCA CGCTGGACGA CGGCATCGAA TACGCCCGCC ATGGCGACTA CGACCTCGCC
ATACTGGACG TCAACATCAT CGGCGGTAAT TCGTTTCCGA TCGCCGCCGC TATCGCCCAT
CGCGGCATCC CCTTCATGTT TTGCTCGGGG TACGGGCGCC TGGGGATACC CGACGTATGG
ATCGACCAGC GCTGCGTTGC CAAACCGTTC AGCGCCGAGC AACTGGACAA GGCACTGAGC
GAGTTGCTCA ACGTGTGA
|
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| Protein sequence | MNSNADNQRP AQRVLLVEDE TMLAMLMEMM LEDLGFATAY HASTLDDGIE YARHGDYDLA
ILDVNIIGGN SFPIAAAIAH RGIPFMFCSG YGRLGIPDVW IDQRCVAKPF SAEQLDKALS
ELLNV
|
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